Query= MSMg01no477_k02.b1 MSMg01no477_k02.b1 CHROMAT_FILE:
MSMg01no477_k02.b1 PHD_FILE: MSMg01no477_k02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:07 2005
(584 letters)
>mm_chr7_124657717_124658698
Length = 982
Score = 1009 bits (522), Expect = 0.0
Identities = 568/584 (97%), Gaps = 2/584 (0%)
Strand = Plus / Plus
Query: 1 gcttcctggggcacaggaggcccctggatgtggaggcctcccaagcactaatcaatccct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcttcctggggcacatgaggcccctggatgtggaggcctcccaagcactaatcaatccct 260
Query: 61 ccctttattcagggtaaagttgagaatgggttgcagtcatcggaagaacgttccactgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctttattcagggtaaagttgagaatgggttgcagtcatcggaagaacgttccactgta 320
Query: 121 ctgtgcagaggagccctcatgaaagacgtattgacgagtctcctcttggtccaggatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtgcagaggagccctcatgaaagacgtattgacgagtctcctcttggtccaggatttt 380
Query: 181 gccggggcccaaaaggcaggcactaagtacaaactctctttctgccacagctcttttagg 240
|| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 381 gctggggcccaaaaggcaggcattaagtacaagctctctttctgccacagctcttttagg 440
Query: 241 tcagaatccctctgtacctgagcacatttaattgaaatcatttcaccgaaaaataaaaat 300
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 441 tcagaatccctctgtacctgagcacatttgattgaaatcatttcaccaaaaaataaaaat 500
Query: 301 aaagtggaggtgactagcataatgaacacgagaagcgcctgtgtgttacagttctgactt 360
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 aaagtggaggtgactagcgtaatgaacatgagaagcgcctgtgtgttacagttctgactt 560
Query: 361 gctgcaaatagagcgttcaaactccagggcccatcgcaggctccttgctcacaagccacg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 gctgcaaatagagcgttcaaactccagggcccatcgcaggctccttgctcacaagccatg 620
Query: 421 gatttcagggagagcaagtcagtgacccctgacacctagctcccgagagaccctgcaccc 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 621 gatttcagggagagcaagtcagtgacccctgacacctagctccagagagaccccgcaccc 680
Query: 481 agggccgaggttcagctgtaatttgctctggctgtgtggtgaggccagtcactttgtccc 540
|||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 681 agggccaaggttcagctgtaatttgctctgactgtggggtgaggccagtcactttgtccc 740
Query: 541 tccaacccttgctctctataaaataagagcttgggattgatgcc 584
||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 741 tccaacccttgctctctataa--taagagcttgggattgatgcc 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 982
Length adjustment: 10
Effective length of query: 574
Effective length of database: 972
Effective search space: 557928
Effective search space used: 557928
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_k02.g1 MSMg01no477_k02.g1 CHROMAT_FILE:
MSMg01no477_k02.g1 PHD_FILE: MSMg01no477_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:07 2005
(406 letters)
>mm_chr7_124788844_124789649
Length = 806
Score = 777 bits (402), Expect = 0.0
Identities = 404/405 (99%)
Strand = Plus / Minus
Query: 1 tcaggcagtctctgttagtgtgaacaacgccccctgtgggactcacaccaactcacaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tcaggcagtctctgttagtgtgaacaacgccccctgtgggactcacaccaactcacaagt 546
Query: 61 agtagtatttgctggagcctgagttaaggttttgtagtaacattattggcatctcaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agtagtatttgctggagcctgagttaaggttttgtagtaacattattggcatctcaatcc 486
Query: 121 ctacatggtggatcagaagtagcttctattttcttgttctcctatgtttgaatctgctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctacatggtggatcagaagtagcttctattttcttgttctcctatgtttgaatctgctat 426
Query: 181 atcacacatttctgcaaaagaacatgcattactttataatgagaaactgaatcaataagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atcacacatttctgcaaaagaacatgcattactttataatgagaaactgaatcaataagc 366
Query: 241 actgttttacgaaaggttgcaccacagcctagaactacacagagtgcatgaactgcccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 actgttttacgaaaggttgcaccacagcctagaactacacagagtgcatgaactgcccag 306
Query: 301 atccggtgaaaggcacttgctatttccctagatgccccacgggtagcaattcattctcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atccggtgaaaggcacttgctatttccctagatgccccacgggtagcaattcattctcct 246
Query: 361 cggncttttcgggataagggtcctttgtcctgatttattcccagt 405
||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cggccttttcgggataagggtcctttgtcctgatttattcccagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
