Query= MSMg01no477_k23.b1 MSMg01no477_k23.b1 CHROMAT_FILE:
MSMg01no477_k23.b1 PHD_FILE: MSMg01no477_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:11 2005
(678 letters)
>mm_chr7_122643220_122644297
Length = 1078
Score = 1253 bits (648), Expect = 0.0
Identities = 669/676 (98%), Gaps = 2/676 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgggaggttc-tcggactatcaggaaagaggagttataaatcacattcaattt 62
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgggagggacat-ggactatcaggaaagaggagttataaatcacattcaattt 262
Query: 63 attcaccgtgctcatctcaccaaatccaaatggctgtcttagagattcagctcactattg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 attcaccgtgctcatctcaccaaatccaaatggctgtcttagagattcagctcactattg 322
Query: 123 ttggtggttttagctttgtccaatcaggagagccctttggtagcttctgttcctgcttat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttggtggttttagctttgtccaatcaggagagccctttggtagcttctgttcctgcttat 382
Query: 183 ggtcagaatgttaacttactttcattacaagaatgctgattaaagttaaattttgatttc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ggtcagaatgttaacttactttcattacaagaatgctgattaaagttaaattttgatttc 442
Query: 243 ttcttgtttaaaacaaagaaagaaagtaaaaggggggaaaggagctggctgtcctcatga 302
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 443 ttcttgtttaaaacaaagaaagaaagtaaaagggggggaaggagctggctgtcctcatga 502
Query: 303 ttaacttagtagaaaacccattctgtgcccgagaaagcctccatcatcagcgaagcaaca 362
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 503 ttaacttagtagaaaacccattctgtgccggagaaagcctccatcatcagcgaagcaaca 562
Query: 363 tgctcctcatgtctgagacatagacggccaggccagcagggcatggcttatccctgcctc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgctcctcatgtctgagacatagacggccaggccagcagggcatggcttatccctgcctc 622
Query: 423 ctttataaaccatcagctagatgtgttcgtctgtttactttggcagtgttggaaaccgac 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctttataaaccatcagctagatgtgttcgtctgtttactttggcagtgttggaaaccgac 682
Query: 483 ccgccttgcacagactaggcaacgtgcttcactgctgagctcaagggcaggccctagctg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ccgccttgcacagactaggcaacgtgcttcactgctgagctcaagggcaggccctagctg 742
Query: 543 ggcagatgagcaacactggggaactgacttgaggaaggcacatgtggtggatatatgact 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ggcagatgagcaacactggggaactgacttgaggaaggcacatgtggtggatatatgact 802
Query: 603 ggctcttctgagctaaagattggtaaataactaagaaccaacagtgcaaaagagaaggat 662
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 803 ggctcttctgagctaaagattggtaaataactaagaaccaacagtgcaaatgagaaggat 862
Query: 663 ggggtgcctgtgtcat 678
||||||||||||||||
Sbjct: 863 ggggtgcctgtgtcat 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_k23.g1 MSMg01no477_k23.g1 CHROMAT_FILE:
MSMg01no477_k23.g1 PHD_FILE: MSMg01no477_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:12 2005
(620 letters)
>mm_chr7_122828749_122829768
Length = 1020
Score = 629 bits (325), Expect = 0.0
Identities = 328/329 (99%)
Strand = Plus / Minus
Query: 1 ctgtcacccattcttctgtttttcaagaaggactgtgtttgtagagtttcagtgaaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgtcacccattcttctgtttttcaagaaggactgtgtttgtagagtttcagtgaaccca 270
Query: 61 caaatcctcatacagtgcttattttggggtttatatgatttcatatttcctaccactcag 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 caaatccccatacagtgcttattttggggtttatatgatttcatatttcctaccactcag 210
Query: 121 gcaggattgtttattttatgggtatgatagctttggccgcatgtatgtctgtgcaacgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gcaggattgtttattttatgggtatgatagctttggccgcatgtatgtctgtgcaacgca 150
Query: 181 tgtgtgtagtgcctaaggaggccagaagagggtattggatcccttacaacttacaagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgtgtgtagtgcctaaggaggccagaagagggtattggatcccttacaacttacaagtta 90
Query: 241 cagatggttgttagctgtcaagtgggagctggaaatcaaatcggggcttctgcaaatgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 cagatggttgttagctgtcaagtgggagctggaaatcaaatcggggcttctgcaaatgca 30
Query: 301 gcaagtactcttaaacactgagccaccgt 329
|||||||||||||||||||||||||||||
Sbjct: 29 gcaagtactcttaaacactgagccaccgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|