Query= MSMg01no477_p15.b1 MSMg01no477_p15.b1 CHROMAT_FILE:
MSMg01no477_p15.b1 PHD_FILE: MSMg01no477_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:34 2005
(702 letters)
>mm_chr7_138477102_138478201
Length = 1100
Score = 1151 bits (595), Expect = 0.0
Identities = 620/629 (98%), Gaps = 2/629 (0%)
Strand = Plus / Plus
Query: 74 cagctgagatgtgtaattgggtgtcaatgtctaggtgacaagtgtaacatcagactcaaa 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 cagctgagatgtgtaattgggtgtcaatgtctaggtgacaagtgtaacatcagactcaaa 333
Query: 134 acttggctcaggtaacgtgaaccctctgaaaaaggaactttctcatcagagaagtaacgt 193
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 334 acttggctcaggtaacgtgaaccctctgaaaaaggaactttctcatcagagaaataa--t 391
Query: 194 ttgttcctgagaagaaatctgcatctgaacaaagcctcagaggtaagtatcctagtaggg 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ctgttcctgagaagaaatctgcatctgaacaaagcctcagaggtaagtatcctagtaggg 451
Query: 254 ggtatgggactttctctgaggtcaccttcgattaaaattagtaagtaataagtaagtaaa 313
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 452 ggtatgggactttctctgaggtcaccttcgattaaaattagtaagtaaaaagtaagtaaa 511
Query: 314 gaaagaaattaataaatggagcttaaaaaaataagacaagaaaaaaaaatcatacaatac 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaaagaaattaataaatggagcttaaaaaaataagacaagaaaaaaaaatcatacaatac 571
Query: 374 aaatttgcctaaaataggtttcctctctgactttgtagctgttcaaccatgaagggtaag 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 572 aaatttgcctaaaataggtttcctctctgactttgtagctgttcaaccatgaagggtgag 631
Query: 434 cctctaccggtgtcactgaatgtgtgcttgaatcttaatagtcaacagcttcatgttgtt 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cctctaccggtgtcactgaatgtgtgcttgaatcttaatagtcaacagcttcatgttgtt 691
Query: 494 tcactgttcagttgaaacactgccaatcacgaatggctttaaatgtaaggatgtttaaaa 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tcactgttcagttgaaacactgccaatcacgaatggctttaaatgtaaggatgtttaaaa 751
Query: 554 accttgatctgccactgcctttttaaataatcgaaaggtaactagcttttgattagcaga 613
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 752 accttgatccgccactgcctttttaaataatcgaaaggcaactagcttttgattagcaga 811
Query: 614 ctctcaaacggtagactttaaatgatcccaaatagtatttatatttcttggaacaagaaa 673
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 812 ctctcaaacggtagactttaaatgatcccaaatagtatttatagttcttggaacaagaaa 871
Query: 674 tgtgcttagacatggaatttggaattctg 702
|||||||||||||||||||||||||||||
Sbjct: 872 tgtgcttagacatggaatttggaattctg 900
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1100
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1090
Effective search space: 754280
Effective search space used: 754280
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no477_p15.g1 MSMg01no477_p15.g1 CHROMAT_FILE:
MSMg01no477_p15.g1 PHD_FILE: MSMg01no477_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:34 2005
(599 letters)
>mm_chr7_138622720_138623719
Length = 1000
Score = 1079 bits (558), Expect = 0.0
Identities = 588/602 (97%), Gaps = 9/602 (1%)
Strand = Plus / Minus
Query: 1 ttctgccccttcttagaggattgcaaagagaattgcccggtgacaaacacaggtgactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ttctgccccttcttagaggattgcaaagagaattgcccggtgacaaacacaggtgactct 739
Query: 61 gaggatg-tagcacgaggctgttgtgattctgttgcctttgtgaaaatttgttcatatct 119
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gaggatgttagcacgaggctgttgtgattctgttgcctttgtgaaaatttgttcatatct 679
Query: 120 tgcggagcagttctggtttgtgctggatttaattatttgtaacacagtgttttcacagct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tgcggagcagttctggtttgtgctggatttaattatttgtaacacagtgttttcacagct 619
Query: 180 cctactaaaagccgagtaatggcagagtgtaatgatgtaagaaccccagactctccctag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cctactaaaagccgagtaatggcagagtgtaatgatgtaagaaccccagactctccctag 559
Query: 240 tgaaggt----gttttttcctgcaggaagccacctctgtgtctttgccaaacatccccat 295
||||||| | ||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 558 tgaaggtggaag----ttcctgcaggaagccacttctgtgtctttgccaaacacccccat 503
Query: 296 aattaggtcacattaaggatgcaatgcccgtaaaattggattgtttaaaaataatgaaac 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aattaggtcacattaaggatgcaatgcccgtaaaattggattgtttaaaaataatgaaac 443
Query: 356 tttaagcagaagggggaaaaaaaggaattttaacaattaaagattttctcagggtgatta 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tttaagcagaagggggaaaaaaaggaattttaacaattaaagattttctcagggtgatta 383
Query: 416 ggggaagatttcctctcagttcaaactgattaaaatgtcaccaaggaaagtgctcctttg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ggggaagatttcctctcagttcaaactgattaaaatgtcaccaaggaaagtgctcctttg 323
Query: 476 cccctttgcaatgtgtaggactggagtgggcttctgatccagacgtgaggaccatgtgtc 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cccctttgcaatgtgtaggactggagtgggcttctgatccagacgtgaggaccatgtgtc 263
Query: 536 tagaccatccagtttcaagtggccatccctaaacacatgtacataagaaccatgctaaat 595
|||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 262 tagatcatccagcttcaagtggccagccctaaacacatgtacataagaaccatgctaaat 203
Query: 596 ga 597
||
Sbjct: 202 ga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space: 583110
Effective search space used: 583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
