Query= MSMg01no480_l05.b1 MSMg01no480_l05.b1 CHROMAT_FILE:
MSMg01no480_l05.b1 PHD_FILE: MSMg01no480_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:05 2005
(243 letters)
>mm_chr7_71881450_71882091
Length = 642
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 tgtggcttctccatttcggattagtgtttccttgcatgttgcctcggctcactgagtgcc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tgtggcttctccatttcggattagtgtttccttgcatgttgcctcgggtcactgagtgcc 260
Query: 61 aggcagtgaactgtagtggacctttgggttgtaaccacgcatgctgttctttcttagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcagtgaactgtagtggacctttgggttgtaaccacgcatgctgttctttcttagaat 320
Query: 121 tctgagggtgatgctcagacactgacagaagtagacctcttcatttcgacccagagtgat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tctgagggtgatgctcagacactgacagaagtagacctcttcatttcgacccagag-gat 379
Query: 181 caaggtcttaaatgctgacacgcaggtaagcacttgaaagacagtggtccagagtcacca 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaggtcttaaacgctgacacgcaggtaagcacttgaaagacagtggtccagagtcacca 439
Query: 241 tgg 243
|||
Sbjct: 440 tgg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no480_l05.g1 MSMg01no480_l05.g1 CHROMAT_FILE:
MSMg01no480_l05.g1 PHD_FILE: MSMg01no480_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:05 2005
(243 letters)
>mm_chr7_72050355_72050997
Length = 643
Score = 441 bits (228), Expect = e-128
Identities = 240/244 (98%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 ggtatgagacaccacacccagaaagacagcctggctcacggaatttgacaatgaacaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggtatgagacaccacacccagaaagacagcctggctcacggaatttgacaatgaacaaat 263
Query: 61 caggtgaaacatagcttgctgtctttgtaaagcttgcattgtgactaagaaaacactggg 120
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 caggtgcaacatagctagctgtctttgtaaagcttgcattgtgactaagaaaacactggg 203
Query: 121 gcttgtgtaattgttccttgggagaggt-aataaatgtccccagatagggcactgatgac 179
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 202 gcttgtgtaattattccttgggagaggttaataaatgtccccagatagggcactgatgac 143
Query: 180 agagtaaagaaacagctccgcccaaatctaacttagtgaaccagtaagggtgttgggttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 agagtaaagaaacagctccgcccaaatctaacttagtgaaccagtaagggtgttgggttt 83
Query: 240 actt 243
||||
Sbjct: 82 actt 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
