Query= MSMg01no481_o19.b1 MSMg01no481_o19.b1 CHROMAT_FILE:
MSMg01no481_o19.b1 PHD_FILE: MSMg01no481_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:43 2005
(428 letters)
>mm_chr7_81657252_81658078
Length = 827
Score = 646 bits (334), Expect = 0.0
Identities = 358/368 (97%), Gaps = 5/368 (1%)
Strand = Plus / Minus
Query: 59 tggagctcactctgtagatgaggctggcctctgactagtacatcttgcctgcctgtgcct 118
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 827 tggagctcactctgtagatgaggctggcctctgactagtacatcctgcctgcctctgcct 768
Query: 119 cccaagtgctgggattagaagtgtgaaccactgccactggactcacactctttttttttt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 cccaagtgctgggattagaagtgtgaaccactgccactggactcacactctttttttttt 708
Query: 179 ttttaaatgtgggttctggggattaaatttaggatcctcagtttggtatgtcaaacactg 238
| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 707 t----aatgtgggttctggggattaaatttaggatcctcagtttggtgtgtcaaacactg 652
Query: 239 ttttgggtaagctatttccatagcccaaatggggggtttttcaatggacacagtggtatt 298
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 651 tattgggtaagctatttccatagcccaaat-gggggtttttcaatggacacagtggtatt 593
Query: 299 ctgggactctgaggcatgcagagaggctgactctgcacaagacagctctacctgagcatc 358
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 592 ctgggactctgaggcatgcagagaggctgactctacacaagacagctctacctgagcatc 533
Query: 359 ctgtgttgaaatgaatggttagtgtgagccttattccaagatctcttggaggcttatgcc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctgtgttgaaatgaatggttagtgtgagccttattccaagatctcttggaggcttatgcc 473
Query: 419 tgtcccct 426
||||||||
Sbjct: 472 tgtcccct 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 827
Length adjustment: 9
Effective length of query: 419
Effective length of database: 818
Effective search space: 342742
Effective search space used: 342742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_o19.g1 MSMg01no481_o19.g1 CHROMAT_FILE:
MSMg01no481_o19.g1 PHD_FILE: MSMg01no481_o19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:43 2005
(656 letters)
>mm_chr7_81429409_81430463
Length = 1055
Score = 1237 bits (640), Expect = 0.0
Identities = 652/656 (99%), Gaps = 1/656 (0%)
Strand = Plus / Plus
Query: 1 cagagaaaggcatttctgtccctggctgtccagctgtttacggactgctttgagactacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagaaaggcatttctgtccctggctgtccagctgtttacggactgctttgagactacg 260
Query: 61 ctgggtcacgtggctccatagtgcagtggttcaaaccacaggaacacaaatcccatctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgggtcacgtggctccatagtgcagtggttcaaaccacaggaacacaaatcccatctct 320
Query: 121 gccttcattatccagacaaaaatcattgaaccctctgtgcctgatgctgcctaagttaat 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccttcattatccagacaaaa-tcattgaaccctctgtgcctgatgctgcctaagttaat 379
Query: 181 atgtgaaaagtatttaggatgctgtgcatttacctggtaactgtaaacacaagataattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgtgaaaagtatttaggatgctgtgcatttacctggtaactgtaaacacaagataattg 439
Query: 241 acagatgtcattattctgagaagggataaagtcattcctgaaggcatattagtattagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acagatgtcattattctgagaagggataaagtcattcctgaaggcatattagtattagtt 499
Query: 301 ggcctcctagagggaatgccaaagaggcgagtggctctgctcatagcccttttgcagggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggcctcctagagggaatgccaaagaggcgagtggctctgctcatagcccttttgcagggg 559
Query: 361 tttgcaggggcggtgtgagctgccaactggagggacctgggaccagaagtagaatgggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttgcaggggcggtgtgagctgccaactggagggacctgggaccagaagtagaatgggaa 619
Query: 421 tgggttatactgtgtgagcgcaaaaacggacatttatattttgaaatgagaaatgcgaca 480
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 620 tgggttatactgtgtaagcgcaaaaacggacatttatagtttgaaatgagaaatgcgaca 679
Query: 481 aacattctcgtggttactatttgtccagctcttagactggtgtgcattctttccatgcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aacattctcgtggttactatttgtccagctcttagactggtgtgcattctttccatgcgg 739
Query: 541 ggctggcaccagatacccacagttgttatcggaaacatgaggcgagatgaaaatggtccc 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 740 ggctggcaccagatacccacagttgttatcagaaacatgaggcgagatgaaaatggtccc 799
Query: 601 cactcttaactcaagtgtatggcaatctgacggtttatttgcctgctctcatcccg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cactcttaactcaagtgtatggcaatctgacggtttatttgcctgctctcatcccg 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1055
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1045
Effective search space: 675070
Effective search space used: 675070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
