Query= MSMg01no482_b10.b1 MSMg01no482_b10.b1 CHROMAT_FILE:
MSMg01no482_b10.b1 PHD_FILE: MSMg01no482_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:55 2005
(660 letters)
>mm_chr7_97934169_97935228
Length = 1060
Score = 1216 bits (629), Expect = 0.0
Identities = 644/649 (99%)
Strand = Plus / Minus
Query: 12 gaattctcacttgcttctcatatgaattcattcaatgtcaacattttattattcctctcc 71
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 860 gaattctcacctgcttctcatatgaattcattcaatgtcaacattttattcttcctctcc 801
Query: 72 ttctgtccctatctcctcttatcacccatcccagaactgtcttccaagtggaagataaag 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttctgtccctatctcctcttatcacccatcccagaactgtcttccaagtggaagataaag 741
Query: 132 atataaataatccaaatactgaacaagataaagaacacatgaatctttgagtacaattat 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atataaataatccaaatactgaacaagataaagaacacatgaatctttgagtacaattat 681
Query: 192 gctttactctttatagataaatctcagatgtatctttatgcagatggctgtcaaaggtag 251
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 680 gctttactctttatagataaatctcagatatatctttatgcagatggctgtcaaaggtag 621
Query: 252 gtagtagtcataattacaggatggttcgataattatactgtattgtacaactgtgctgtt 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gtagtagtcataattacaggatggttcgataattatactgtattgtacaactgtgctgtt 561
Query: 312 gtagaattatatacttctgtttgcatcattttatagaaataacacgagtacattggatct 371
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 560 gtagaattatatacttctgtttgcatcattttatagaaataacacgagtacatcggatct 501
Query: 372 gaagaaagaaatgaggcaaagtattgatcactaacctatgcatccaactagaactaaata 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaagaaagaaatgaggcaaagtattgatcactaacctatgcatccaactagaactaaata 441
Query: 432 gtaattaggcttttagcatgacataagagcatgacagtttcttggaggaatatattaatc 491
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtaattaggcttttagcatgacttaagagcatgacagtttcttggaggaatatattaatc 381
Query: 492 cagcattcttctaaatatatataagatgaaaggccatcttaagattttagaacggcagtc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagcattcttctaaatatatataagatgaaaggccatcttaagattttagaacggcagtc 321
Query: 552 actgtgtcaaacataagtatgatgtggtgatcaaaactaatattcacatcaaataaagct 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 actgtgtcaaacataagtatgatgtggtgatcaaaactaatattcacatcaaataaagct 261
Query: 612 tatgctatgcttcttaaatctcttttataacaaataaagttgttcttta 660
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tatgctatgcttcttaaatctcttttataacaaataaagttgttcttta 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_b10.g1 MSMg01no482_b10.g1 CHROMAT_FILE:
MSMg01no482_b10.g1 PHD_FILE: MSMg01no482_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:55 2005
(611 letters)
>mm_chr7_97761646_97762656
Length = 1011
Score = 1031 bits (533), Expect = 0.0
Identities = 600/641 (93%), Gaps = 31/641 (4%)
Strand = Plus / Plus
Query: 1 cagttaattagtttataaatgtgaatattaagttatcccttaaacaaattattgaaaaga 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 cagttaattagtttataaatgtgaatattcagttatcccttaaacaaattattgaaaaga 260
Query: 61 ctattctttccaccatggaattatcttggtcctactgttgaaaactggccattgatgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctattctttccaccatggaattatcttggtcctactgttgaaaactggccattgatgaat 320
Query: 121 gtgtttattcttaaaatcacaattacactccattcatctgtatggctattactgtgccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtttattcttaaaatcacaattacactccattcatctgtatggctattactgtgccag 380
Query: 181 taccacactcagttttaaaatcaggaagcatgaatcttctgctgatcccttgtattttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taccacactcagttttaaaatcaggaagcatgaatcttctgctgatcccttgtattttta 440
Query: 241 tgtgaattttggcattaatttgttgatttgggggaagggagacatgtcagcagaattttt 300
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 tatgaattttggcattaatttgttgatttggggaaagggagacatgtcagcagaattttt 500
Query: 301 ataatggtcttgttgaatgtctaatatatttgggtagttcttttatttatttattg---- 356
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataatggccttgttgaatgtctaatatatttgggtagttcttttatttatttatttattt 560
Query: 357 -------------------------ttgttggtttgttttttttccc-gagacagggttt 390
|||||| ||| ||||||||||| ||||||||||||
Sbjct: 561 atttatttatttatttatttatttattgttgtttt-ttttttttccccgagacagggttt 619
Query: 391 ctctgtatagatctggctgtcctggaattcactctgtagaccaggctggcctcaaactca 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctctgtatagatctggctgtcctggaattcactctgtagaccaggctggcctcaaactca 679
Query: 451 gaaatccgcctgcctctgcctcccaagtgctgggatcaaaggtgtgtgccaccacgcccg 510
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 680 gaaatctgcctgcctctgcctcccaagtgctgggatcaaaggtgtgtgccaccatgcccg 739
Query: 511 gcctagttctatcatcttaacaacattaagtctttcaaattatagtgatggaatgtattt 570
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gcctatttctatcatcttaacaacattaagtctttcaaattatagtgatggaatgtattt 799
Query: 571 tggtttgatgtataattaactaatgatgctatttctttgtc 611
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 800 tggtttgatgtatacttaactaatgatgctatttctttgtc 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
