NNNNCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCAAATTGCTTTCCAAAGGTATCTTCCAATGACCAAGGGC
CACAAGGTTATATCATGTGATGTATCAAGATGCTGAAAAGCATACTTCAT
ACTCTGATTAGTCTTTCAAATTCAAATTGTCTCCTTTCTCCTCTCCCCCT
TCACCTACTCCTCTTCCTCCACCACATCCTCCACAACTTCCTTCTTTCTT
TGATTCTTGAAAGAGTGTCCTCTATAGCACAAGGTCATCTCTCACCTGAG
GTCTTCCTTTATCTGTCCCCTGAGTGCTGGGATTCTAAGCACGGGCCAAT
AGGAGTCTCAAGGTCTTCTCTTTAAAACAGGCCATCATCTGTTAGCTACT
ATTGACTTTCTTTTCTTATTTTCATCTTCCCACATGTCCTTTCAGCATGT
ACCTTCTCTCATTATTGGAGAAGAGCATTTGAGTCTGTATCAAGAGGAAG
CAAGGAGCCGAGTGGGCCCGACCTGTGCCCCTGAGCCAGCAGTTCAAATG
TAAGCATTTTCCCAGTACTGTACCTTCTGTTACTTGGTGACGAATAGGTA
GCAGGTGTTGAGGGAAAGCAGCAGTTTATACCGTTATTATTTCTGGATAG
GCCAGCTGTTCTGAATGATAACACATAATATGAATCTGGGACCAGGTGCC
TTTGGGNCTTAGAATTTTCTTACTTCCTCTTAGTGATAAACATGATAACA
CATACACN

ACCCCCCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGTGTTTTGTCATGGTAATCT
AAAAGTAACACATAGTATAAAATGGCGGTGCCCAGAAAGNGTTCCCTTGG
GNAAGNTTTCCATTTGGAAACNNCCCCCTTTTTAATAACTACTTTTTTTC
CTTTTTCTCCNCCCACTAATTGGAAATTTTATTTTTCAAGAAAACCCCTT
TTTTAAAAAAATTTTGGGGTTTTTGGGTGGCTTAAAGGGCTTTTTTTAAA
AAAAAAAATTTTTTTTGGAAAAAAAGTTGGGTTTCCTTATTAAACCAAAC
CCCCCTTTGAAAAATGCTTTGTATTCCCAGGGGTTTTTAAATTTGTTTGA
ACTTTTTTTTTTTTTTTTGTGGGATTTTTAAAATTTGTTNNNNNTTTTTN
CCTATCTCCTATTTTTTTTCTACAAACACCNNAAATTTTTTTTTTTTTCT
NCCCCATAGCCATTTTTTTTATAACAATTCCTTTTTTNATTAAACCCCCC
CCTTTTTCTTCTCCCTCCTCTNNNTTTATGTTTTTTTTTTTCGCCCTCCC
CATCCTTTTTTTTTTTTTTTCCGCTCTTTTTTTTCTTTCTTTTCTCCTTC
GAAAAACAATTTTAAANNNNTTATATAATTTTTTTTCCCCTTCCTTTTCT
CCTTTCTTTTTTTTTTTTTTTTTCC

Query= MSMg01no483_n06.b1 MSMg01no483_n06.b1 CHROMAT_FILE:
MSMg01no483_n06.b1 PHD_FILE: MSMg01no483_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:10 2005
         (655 letters)



>mm_chr7_81895837_81896891
          Length = 1055

 Score = 1158 bits (599), Expect = 0.0
 Identities = 635/651 (97%), Gaps = 7/651 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaaattgctttccaaaggtatcttccaatgaccaagggccacaaggttatatca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaattgctttccaaaggtatcttccaatgaccaagggccacaaggttatatca 264

                                                                       
Query: 65  tgtgatgtatcaagatgctgaaaagcatacttcatactctgattagtctttcaaattcaa 124
           ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 tgtgatgtatcaagatgttgaaaagcatacttcatgctctgattagtctttcaaattcaa 324

                                                                       
Query: 125 attgtctcctttctcctctcccccttcacctactcctcttcctccaccacatcctccaca 184
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 attgtctcctttctcctctcccctttcacctactcctcttcctccaccacatcctccaca 384

                                                                       
Query: 185 acttccttctttctttgattcttgaaagagtgtcctctatagcacaaggtcatctctcac 244
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 acttccttctttctttgattcttgaaagagtgtcctctatagcacaaggtgatctctcac 444

                                                                       
Query: 245 ctgaggtcttcctttatctgtcccctgagtgctgggattctaagcacgggccaataggag 304
           ||||||||||||||||||||       |||||||||||||||||||||||||||||||||
Sbjct: 445 ctgaggtcttcctttatctg-------agtgctgggattctaagcacgggccaataggag 497

                                                                       
Query: 305 tctcaaggtcttctctttaaaacaggccatcatctgttagctactattgactttcttttc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 498 tctcaaggtcttctctttaaaacaggccatcatctgttagctactattggctttcttttc 557

                                                                       
Query: 365 ttattttcatcttcccacatgtcctttcagcatgtaccttctctcattattggagaagag 424
           |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 558 ttattttcatcttcccacatgtccttgcagcatgtaccttctcttattattggagaagag 617

                                                                       
Query: 425 catttgagtctgtatcaagaggaagcaaggagccgagtgggcccgacctgtgcccctgag 484
           ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 618 catttgagtctgtatcaggaggaagcaaggagccgagtgggcctgacctgtgcccctgag 677

                                                                       
Query: 485 ccagcagttcaaatgtaagcattttcccagtactgtaccttctgttacttggtgacgaat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ccagcagttcaaatgtaagcattttcccagtactgtaccttctgttacttggtgacgaat 737

                                                                       
Query: 545 aggtagcaggtgttgagggaaagcagcagtttataccgttattatttctggataggccag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 aggtagcaggtgttgagggaaagcagcagtttataccgttattatttctggataggccag 797

                                                              
Query: 605 ctgttctgaatgataacacataatatgaatctgggaccaggtgcctttggg 655
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ctgttctgaatgataacacataatatgaatctgggaccaggtgcctttggg 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space:   674025
Effective search space used:   674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)