CCCCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCCAAGAGGA
TCCGCGGAATTCTCTGTTCCCTATTTGAGACCTTTTCTATAAATCTAAAA
CTATTCACACAAGCAAAAAAAATGTTTTAAAGTATATGACACCTGCTGAA
TGGCATATGGAAGAGCAAGTAATGATCCTGCTAAATAAAGCCACTAAAAG
TCCCTGCTCCCTGCTCTCAACACGCACAGCAAGCCTGCACACTGTCAGGA
CTGAACCCACCATTCCTCTGGCCACTAGGCACCCAGCATCTGCTCTGAGG
ACACATGTCAAAGAGGTGCTGGTTTGCAATGATGTGCATGTTCTCTGTCT
GCAGAAAACAGACAAAAATTGAAAACAGAAAGAGCCTGGGCACAGGACAT
AAATAACCCAAATCTTAACACACATGGGCCTCTTGGGCCCAAATGCAAGC
CATCATCTTCCATATCACAGGGCATGAAAATCATGGGGAGGGTGCTCACT
TTGGCAGCTCACATACTAAAACTGGTGCGACGTTGAAAGAAGCGGCACAG
CCCCTGTGCAAGGACGACATGCACATGCGTGAAGTATTCCATATTTTAAT
TTAAAAAGTCATGGGAGGGACTGGGATGCTGGCTCAGTTAGCAGTATATA
CTGTTCTTCCGAAGGACCCAAGATCTGATCCCAGAACCCACAGTGTGAGC
TCACAACCACCAGTAACTCACACTCTAGAGACTGCTGCTCTCTCCTGGNC
TCCNTAGCACTGT

AAAACCACTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTCTCTCCGCGGAATTCAAAGGCATGAAAAATG
AATTTCGCGAAATTAATGTTGGGGTGGCGGAGAAGGGGTGGGCTGATGGT
CTCCTCCCCCCCCTTCTCCCTCCCCCCTCCCCCCCCCTCTTCCCCCCCCC
CGCCCTCTTCCCTTCCCCCCTTCCCCCCTTCCCCCCCCCCCTCTTTTTCT
TTCCCCCCCCCCCCCCCCCCCTCCCCCTTTTTCCCTCCCTTTCCTTTTCT
TTCTCCCCCCCCTCTTTTTCCCCCCCCTTCCCCCTCCTCTCCTCCCCCCC
CCTTTTCCTTCCCCCCTCCCTCCCCCCCCCCCCCCCCCCTTCTTTTTTTT
CCCCCCCCCCCCCCCCCCATTTTATCCCTCCCTCCCTTCCTCTTCCCCCT
TTTTTTCTCCCCCCCCCTCCCCCCCCCCTTCTCCTTTTTTTTCTCCCCCC
CCCCCCCTCCCCCTTTTCCCCCCCCCCCCCCTTCCCCCTCCCCCTCCCTT
TTTCCCCTTTTTCCCCCCTTTCCCCCCCCCTTCTTTTCCCTCTTTTCCCC
CCCCCCTCCTCCTCTCCCTTCCCCCCCCTCCCCCCCCTCTTTTTTTCCCT
CCCCCCCTCTACCCCCCTTTCCCCCCCTCTCCCCCCCCTTTTTCTCCCCT
ATTCCCCCCCCCCCCCCTTCTCTCTTCCCTCTCCCCCTCCTCCTCCTTTT
TTTTCCCTTTCCCTCCTCCTCCCCCCCCTCCN

Query= MSMg01no483_p05.b1 MSMg01no483_p05.b1 CHROMAT_FILE:
MSMg01no483_p05.b1 PHD_FILE: MSMg01no483_p05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:20 2005
         (614 letters)



>mm_chr7_123834794_123835807
          Length = 1014

 Score = 1054 bits (545), Expect = 0.0
 Identities = 593/609 (97%), Gaps = 2/609 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   ggaattctctgttccctatttgagaccttttctataaatctaaaactattcacacaagca 66
           |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ggaattctctgtgctatatttgagaccttttctataaatctaaaactattcacacaagca 583

                                                                       
Query: 67  aaaaaaatgttttaaagtatatgacacctgctgaatggcatatggaagagcaagtaatga 126
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 582 aaaaaaatgttttaaagtatatgacacctgctgaatggcatatggaagagcaagcaatga 523

                                                                       
Query: 127 tcctgct-aaataaagccactaaaagtccctgctccctgctctcaacacgcacagcaagc 185
           ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tcctgctaaaaaaaagccactaaaagtccctgctccctgctctcaacacgcacagcaagc 463

                                                                       
Query: 186 ctgcacactgtcaggactgaacccaccattcctctggccactaggcacccagcatctgct 245
           ||||||||  || ||||||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 462 ctgcacaccatcgggactgaacccaccattcctctggctactaggcgcccagcatctgct 403

                                                                       
Query: 246 ctgaggacacatgtcaaagaggtgctggtttgcaatgatgtgcatgttctctgtctgcag 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctgaggacacatgtcaaagaggtgctggtttgcaatgatgtgcatgttctctgtctgcag 343

                                                                       
Query: 306 aaaacagacaaaaattgaaaacagaaagagcctgggcacaggacataaataacccaaatc 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aaaacagacaaaaattgaaaacagaaagagcctgggcacaggacataaataacccaaatc 283

                                                                       
Query: 366 ttaacacacatgggcctcttgggcccaaatgcaagccatcatcttccatatcacagggca 425
           |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 282 ttaaca-acatgggcctcttgggcccaaacgcaagccatcatcttccatatcacagggca 224

                                                                       
Query: 426 tgaaaatcatggggagggtgctcactttggcagctcacatactaaaactggtgcgacgtt 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 223 tgaaaatcatggggagggtgctcactttggcagctcacatactaaaactggtgcgacgtc 164

                                                                       
Query: 486 gaaagaagcggcacagcccctgtgcaaggacgacatgcacatgcgtgaagtattccatat 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gaaagaagcggcacagcccctgtgcaaggacgacatgcacatgcgtgaagtattccatat 104

                                                                       
Query: 546 tttaatttaaaaagtcatgggagggactgggatgctggctcagttagcagtatatactgt 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 103 tttaatttaaaaagtcatgggagggactgggatgctggctcagttagcagtatatgctgt 44

                    
Query: 606 tcttccgaa 614
           || ||||||
Sbjct: 43  tcctccgaa 35


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space:   606416
Effective search space used:   606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)