Query= MSMg01no484_c10.b1 MSMg01no484_c10.b1 CHROMAT_FILE:
MSMg01no484_c10.b1 PHD_FILE: MSMg01no484_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:36 2005
(651 letters)
>mm_chr7_71176769_71177819
Length = 1051
Score = 1183 bits (612), Expect = 0.0
Identities = 639/648 (98%), Gaps = 2/648 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttactat-tcgtaaaattaagaattatatttataaaccatgagctcaacattt 62
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttactatat-gtaaaattaagaattatatttataaaccatgagctcaacattt 262
Query: 63 tgcctttcccacagtgagagaggaccttagcctttggagctctgaccctgcacttggtga 122
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 263 tgcctttcccacagtgagagaggaccttagcctttggagctctggccctgcacttggtga 322
Query: 123 gatgtttccctgagggttgctctatcaaagctgtgactgtctcagccacacgacatgcta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gatgtttccctgagggttgctctatcaaagctgtgactgtctcagccacacgacatgcta 382
Query: 183 ttatcaccaagtttcaacccacttcttttcatttatcctcacagagcctattaggccttc 242
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 383 ttatcaccaagtttcaacccacttcttttcatttatcctcacggagcctattaggccttc 442
Query: 243 aatccttctacttcaggcctgcctttaggatctcttttctcgtcaggaagaaaagatgta 302
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 443 aatccttctacttcaggcctgcctttaggatcgcttttctcgtcaggaagaaaagatgta 502
Query: 303 aactctgtgctctttgtcttgccctcttctcacaagctctcttctctgtagctctacagt 362
||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 503 aactctgtgctctctgtctcgccctcttctcacaagctctcttctctgcagctctacagt 562
Query: 363 ggtgcttactttcaggccctgacagctgcaccctatgccccctgtatttatcatcacccc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggtgcttactttcaggccctgacagctgcaccctatgccccctgtatttatcatcacccc 622
Query: 423 ttgaatacctggtctggtgtctttggctgatgtccaacatggcttctcagtcaccctcct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttgaatacctggtctggtgtctttggctgatgtccaacatggcttctcagtcaccctcct 682
Query: 483 gactcagttgtaccctgagggtgccagccttcatgtgcacaggacctccaccctgactcc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gactcagttgtaccctgagggtgccagccttcatgtgcacaggacctccaccctgactcc 742
Query: 543 ttcctgggtggcctgggagccttgattgttccttaagaccaacagtggttcggaggccca 602
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttcctgggtggcctgggagacttgattgttccttaagaccaacagtggttcggaggccca 802
Query: 603 agcattcctgtcttttctaatgaacatattccacaggatgctgtggac 650
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agcattcctgtcttttctaatgaacatattccacaggatgctgtggac 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_c10.g1 MSMg01no484_c10.g1 CHROMAT_FILE:
MSMg01no484_c10.g1 PHD_FILE: MSMg01no484_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:36 2005
(250 letters)
>mm_chr7_71314045_71314693
Length = 649
Score = 402 bits (208), Expect = e-117
Identities = 239/250 (95%), Gaps = 3/250 (1%)
Strand = Plus / Minus
Query: 1 caaaaattggacttagttgccaggcttctgacaatctccttcatttactgagccactgaa 60
||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||
Sbjct: 393 caaaaattggacttagttg-caggcttctggcaatctcctttatttactgagccactgaa 335
Query: 61 ggggttagagcaggttgaggacctgaggtctgctgagggagctacagggattgggatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ggggttagagcaggttgaggacctgaggtctgctgagggagctacagggattgggatctt 275
Query: 121 gagatgtgcctaggtagttaatactcaaattaagttatctagctggaatcccaggtaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gagatgtgcctaggtagttaatactcaaattaagttatctagctggaatcccaggtaaca 215
Query: 181 ataagatgtaattaatacatatatatatatatgtatgtatgtatatatatgtgtatatgt 240
|||||||||||||||||||||||||||||||| ||| ||| ||||||||| | ||||||
Sbjct: 214 ataagatgtaattaatacatatatatatatatatatatatatatatatatat--atatgt 157
Query: 241 atgtatatgt 250
||| |||||
Sbjct: 156 gtgtgtatgt 147
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 649
Length adjustment: 9
Effective length of query: 241
Effective length of database: 640
Effective search space: 154240
Effective search space used: 154240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
