NNAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTGTCATTTCGACTCAACTTTTACAAGGCCAGCTGGGATCCC
AGGGCCGTCCCCACCCTACCCACCTCCTGATGATGGAATACCTCAGCTCA
ACACTTACAGGTTGGGAGCTAGGCAAGGATGTTTCTCCGAGGAGTTTAGC
ATCCTTAGCTATATGTGGAATAGAAGCTCAGGTACAGGACATCTCTGTGA
CAGTGACTCTCTGATGGATCTCCCCTCTCTCTACCCTAATGGAAACAATA
ACAGGGAAAATAGATGGCCACTGATCTGTGACGAGTACTCTCATTCTTCC
ACCCACTCTGTCTCTCCCAAGGCTAACAAGCTAGTTTATACATCACAGGG
AAATGGTGGGTTTTTTTTTAACCTTTGTAAATTGCCTCTCTCATCCCCAC
CCTCACCCCCATCCCTCCACATCCCCAATTACATCCCACCCCAACATCCC
ATCCCATCCCACCCCATCCCCCACACTGACTCTTTGTTACCTCCCTGTTT
TGGCATAGCACCTGACCCTTTCCCTTCCATCTCATCTCTGCCTTTGGCCA
ACTAATTTATTGATTGATTCTCCCCGAAAGCCAAATGAAGTTCTCTTTTA
TTGAGACAATTTCTCAAAGTCTGGAACTTGCAGACGACGGTGACTTCACC
TCATGTTCTCTTTAATTAATGGACAGCCACTCGTGGCACTGATCCTCAAC
CCCCCCCCCCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTGGTGCCAGAGTTACTGGAGGCTGTGAACTGCCAG
AGAAGGTTGTTGGGAACCTGACTTGATTCTCTGGAAGAGCATTAACTGCT
GAGCTATCTTTGCAGTTTGTGGATACACACACACACACACACACACACAA
TGGTTAAAGTCTAGAGGTAAGGGCTTGGATATAACTCAGTTTGTATATTT
CTTACCTAGCATGTATGAAGTCAAAGCCCTGGGTTTGTTTAGAAATCACC
ACTAATTCCCAACATTGTATAAACCAGGTGTGATAGTTATGTTTGTTGTT
ATCGTGGCTCTCAAGACATGGAGGCACAGTCTCCATGGACATGGACATTC
TCAGCTCTATAGCCCAGTTTGAGGCACCTTGGGTTAAATGAGACCCTGTC
TATTTTTTTTTTTTTTTTTTGGTTTCAAGACAGGGTTTCTCTGTGTAGCC
CTGGCTGTCCTGGAACTCACTCTGTAGACCAGACTGGCCTCGAACTCAGA
AATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCAACAC
CACTGCCTGGCTGAGACCCTGTCTTTAAAAAAGAAAAAACCCTTGGGGGT
ACTGGTGGCTTGTGCCTTTAATCCCAGCACTCANGGTGGTGGTGGTGGTG
GTGGTNNNNCNCNTTNTTCNTT

Query= MSMg01no484_c11.b1 MSMg01no484_c11.b1 CHROMAT_FILE:
MSMg01no484_c11.b1 PHD_FILE: MSMg01no484_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:36 2005
         (635 letters)



>mm_chr7_140488998_140490033
          Length = 1036

 Score =  982 bits (508), Expect = 0.0
 Identities = 570/604 (94%), Gaps = 28/604 (4%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgt---catttcgactcaacttttacaaggccagctgggatcccagggccgtcc 61
           |||||||||   |||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gaattctgtcaccat---gactcaacttttacaaggccagctgggatcccagggccgtcc 542

                                                                       
Query: 62  ccaccctacccacctcctgatgatggaatacctcagctcaacacttacaggttgggagct 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccaccctacccacctcctgatgatggaatacctcagctcaacacttacaggttgggagct 482

                                                                       
Query: 122 aggcaaggatgtttctccgaggagtttagcatccttagctatatgtggaatagaagctca 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggcaaggatgtttctccgaggagtttagcatccttagctatatgtggaatagaagctca 422

                                                                       
Query: 182 ggtacaggacatctctgtgacagtgactctctgatggatctcccctctctctaccctaat 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtacaggacatctctgtgacagtgactctctgatggatctcccctctctctaccctaat 362

                                                                       
Query: 242 ggaaacaataacagggaaaatagatggccactgatctgtgacgagtactctcattcttcc 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaaacaataacagggaaaatagatggccactgatctgtgacgagtactctcattcttcc 302

                                                                       
Query: 302 acccactctgtctctcccaaggctaacaagctagtttatacatcacagggaaatggtggg 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acccactctgtctctcccaaggctaacaagctagtttatacatcacagggaaatggtggg 242

                                                                       
Query: 362 tttttttttaa-cctttgtaaattgcctctctcatccccaccctcacccccatccctcca 420
           ||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 241 tttttttttaaacctttgtaaactgcctctctcatccccaccctcacccacatccctcca 182

                                                                       
Query: 421 catcccca-----------at---t--acatcccaccccaacatccc--atcccatccca 462
           ||||||||           ||   |  ||||||| ||   |||||||  || ||||||||
Sbjct: 181 catccccaccctcacccccatccctccacatccctcc---acatccccaattccatccca 125

                                                                       
Query: 463 ccccatcccccacactgactctttgttacctccctgttttggcatagcacctgacccttt 522
           |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 124 ccccatgccccacactgactctttgctacctccctgttttggcatagcacctgacccttt 65

                                                                       
Query: 523 cccttccatctcatctctgcctttggccaactaatttattgattgattctccccgaaagc 582
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  cccttccatctcatctctgcctttggccaactaatttattgattgattctccccgaaagc 5

               
Query: 583 caaa 586
           ||||
Sbjct: 4   caaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1036
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1026
Effective search space:   641250
Effective search space used:   641250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)