Query= MSMg01no484_f02.b1 MSMg01no484_f02.b1 CHROMAT_FILE:
MSMg01no484_f02.b1 PHD_FILE: MSMg01no484_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:50 2005
(263 letters)
>mm_chr7_29309163_29309825
Length = 663
Score = 387 bits (200), Expect = e-112
Identities = 230/240 (95%)
Strand = Plus / Plus
Query: 4 ggaattcttcattgcgtggatgcaccaagaccacaccttaatttatagttattcatgcct 63
||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 204 ggaattcttcactgtgtggatgcaccaagaccacaccttaatttatagctattcatgcct 263
Query: 64 gtttaaagtatttatttatatgtgtgtgtctcagactcagtccccgcaaaatatctattt 123
||||||| |||||||||||| ||||| ||||||||||| |||||| |||||| |||||||
Sbjct: 264 gtttaaaatatttatttatacgtgtgggtctcagactcggtccccacaaaatgtctattt 323
Query: 124 ttttactttgtaaacattcttcaaatacacaatgataaaagacctctgtggtgtgtgtgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttactttgtaaacattcttcaaatacacaatgataaaagacctctgtggtgtgtgtgt 383
Query: 184 tggtgttgactccttttcttttgtccttggggaaaaaaccccacaacttcaagtctacag 243
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggtgttgactcctgttcttttgtccttggggaaaaaaccccacaacttcaagtctacag 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no484_f02.g1 MSMg01no484_f02.g1 CHROMAT_FILE:
MSMg01no484_f02.g1 PHD_FILE: MSMg01no484_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:50 2005
(607 letters)
>mm_chr7_29407899_29408905
Length = 1007
Score = 669 bits (346), Expect = 0.0
Identities = 373/382 (97%), Gaps = 1/382 (0%)
Strand = Plus / Minus
Query: 1 caggccacccaaggatactgagtaagaccctaaccctagcaaaacaaggcaaacactgaa 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 382 caggccacccaaggatactgagtaagaccctaaccctggcaaaacaaggcaaacactgaa 323
Query: 61 ggcgaggaatggacacataggacaattctggttaaacctcaggcctcactcaaatgtccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggcgaggaatggacacataggacaattctggttaaacctcaggcctcactcaaatgtccc 263
Query: 121 caaggtcaccagtaattttagtcacaacccaggatctcatcttgggacagtgccttctcc 180
||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 262 caaagtcaccagtaagtttagtcacaacccaggatttcatcttgggacagtgccttctcc 203
Query: 181 attttccgctgttgctttgactggattcataatccaggttggcctcaaacaagaaatcct 240
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atctcccgctgttgctttgactggattcataatccaggttggcctcaaacaagaaatcct 143
Query: 241 cctgcctcagtttcctgagtgccagggctgcaaggccacacacaccatcacacccagcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 cctgcctcagtttcctgagtgccagggctgcaaggccacacacaccatcacacccagcac 83
Query: 301 ttaagaattttttctttt-gtggctcctgtgttttctgagtattagtcagttattttgta 359
|||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 82 ttaagatttttttctttttgtggcttctgtgttttctgagtattagtcagttattttgta 23
Query: 360 aaatatcgctgctttaggtctc 381
||||||||||||||||||||||
Sbjct: 22 aaatatcgctgctttaggtctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
