Query= MSMg01no484_i07.b1 MSMg01no484_i07.b1 CHROMAT_FILE:
MSMg01no484_i07.b1 PHD_FILE: MSMg01no484_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:07 2005
(324 letters)
>mm_chr7_135364712_135365435
Length = 724
Score = 578 bits (299), Expect = e-169
Identities = 321/335 (95%), Gaps = 11/335 (3%)
Strand = Plus / Minus
Query: 1 ggagatccaggctggcagagcctaggaggtttctgaaggcaaaccgagtcctttaccttg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 649 ggagatccaggctggcagagcctaggaggtttctgaaggcaaactgagtcctttaccttg 590
Query: 61 gagtttcctcaacattggctaattactattcctacagccaagccaaaccaattt------ 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gagtttcctcaacattggctaattactattcctacagccaagccaaaccaattttgtaaa 530
Query: 115 -----tgggtaattctgttacacagctagggtagaggacgactacattaatccctagagc 169
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tgtcctgggtaattctgttacacagctagggtagaggacgactacattaatccctagagc 470
Query: 170 aggcagatgggcccccgtgggaggggtaaaggccttcgagaggttggacaccttactctt 229
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 aggcagatgggcccccgagggaggggtaaaggccttcgagaggttggacaccttactctt 410
Query: 230 tatcccatagtgctgctcaaattgtagcagtttcttgctatccagagccacagagcagga 289
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tatcccagagtgctgctcaaattgtagcagtttcttgctatccagagccacagagcagga 350
Query: 290 agctatgacctactagaacaaacgtgctttgcaac 324
|||||||||||||||||||||||||||||||||||
Sbjct: 349 agctatgacctactagaacaaacgtgctttgcaac 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_i07.g1 MSMg01no484_i07.g1 CHROMAT_FILE:
MSMg01no484_i07.g1 PHD_FILE: MSMg01no484_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:07 2005
(438 letters)
>mm_chr7_135278443_135279278
Length = 836
Score = 795 bits (411), Expect = 0.0
Identities = 432/439 (98%), Gaps = 4/439 (0%)
Strand = Plus / Plus
Query: 1 tcctcaggcgtaggatttcccttttggaacctagaccctcatgagctaggcaccgttcct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctcaggcgtaggacttcccttttggaacctagaccctcatgagctaggcaccgttcct 260
Query: 61 tgttgtgggtctctgatcttagatgt-tcccaagaagcctccctggacctgggaaatgtc 119
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 261 tgttgtgggtctctgatcttagat-tctcccaagaagcctccctggacctgggaaatgtc 319
Query: 120 gtctctcttcctgaaagccacacatcctgtcttccccaggcacagagacaccaagcagca 179
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 320 gtctctcttcctgaaagccacacatcttgtcttccccaggcacagagacaccaagcagca 379
Query: 180 gtacttttgaattggagatgtcccaggagggcttcagtgctgtgtttacacctgtgagtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtacttttgaattggagatgtcccaggagggcttcagtgctgtgtttacacctgtgagtt 439
Query: 240 ggtccctgtcttaggctagtgatgtaggctggtggacagggggggcactggggaggcaag 299
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 440 ggtccctgtca-aggctagtgatgtaggctggtggacagggggg-cactggggaggcaag 497
Query: 300 tgctagctagctaggtgcgtggagccagggagggcaggttggcatcctgctcagccctgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tgctagctagctaggtgcgtggagccagggagggcaggttggcatcctgctcagccctgg 557
Query: 360 gatccttccctccaggatggaccagttctgggggctgtgggaagcttcagctggtctgga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gatccttccctccaggatggaccagttctgggggctgtgggaagcttcagctggtctgga 617
Query: 420 ggtgccttcttgtacccct 438
|||||||||||||||||||
Sbjct: 618 ggtgccttcttgtacccct 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 836
Length adjustment: 9
Effective length of query: 429
Effective length of database: 827
Effective search space: 354783
Effective search space used: 354783
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
