Query= MSMg01no484_j23.b1 MSMg01no484_j23.b1 CHROMAT_FILE:
MSMg01no484_j23.b1 PHD_FILE: MSMg01no484_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:15 2005
(639 letters)
>mm_chr7_88710057_88711094
Length = 1038
Score = 1029 bits (532), Expect = 0.0
Identities = 601/642 (93%), Gaps = 33/642 (5%)
Strand = Plus / Minus
Query: 1 tgtgtgtgggcagcccagtgtgtgtgctaggaatcaaactggatccttagcaagagcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgtgtgtgggcagcccagtgtgtgtgctaggaatcaaactggatccttagcaagagcagt 681
Query: 61 aggcaggagtaacagctgagccagcactccaggtgcagagaggggcagcctcttaatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aggcaggagtaacagctgagccagcactccaggtgcagagaggggcagcctcttaatgtc 621
Query: 121 tgccgtatgggctgtggttcattactctgctaaaccttcattttgtactttataaaatgc 180
||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 620 tgccgtatgggctgtggttcattactctgctaaaccttcatgtcgcactttataaaatgc 561
Query: 181 agtttgtcaccagtgttccccgaccccatcctgatcccactaagaaactgaaggaaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtttgtcaccagtgttccccgaccccatcctgatcccactaagaaactgaaggaaagct 501
Query: 241 aaagattttgt---agccgaggggaaaagtgtactggggcctgtgctccaggagctgggc 297
||||| || ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 500 aaaga----gtgggagccgaggggagaagtgtactggggcctgtgctccaggagctgggc 445
Query: 298 tttgctgctactgagcacgaagaccagatggccctcagagagagcagatgctggcaggga 357
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttgctgctactgagcacgcagaccagatggccctcagagagagcagatgctggcaggga 385
Query: 358 aggctgggctcctattagcgtgtgttaaaggattgtcagtcttcttgctggtatgttccc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aggctgggctcctattagcgtgtgttaaaggattgtcagtcttcttgctggtatgttccc 325
Query: 418 catggctcaggttggttctttgagcttcagcttctgtctgtctctctgtctctctctgtg 477
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catggctgaggttggttctttgagcttcagcttctgtctgtctctctgtctctctctg-- 267
Query: 478 tctctgtctctgtctctgtctctctctctctcacacacacacacacacacagagagagag 537
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 266 ----tgtctctgtctctgtctctctct------cacacacacacacacacagagagagag 217
Query: 538 agagagagagagagagagagagagagagagagagagagagagagagaggcgcaagttctc 597
||| | |||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 216 aga-------------a-agagagagggagagagagagagagagagaggtgcaagttctc 171
Query: 598 tttatttttagagagcctatcctccatgcataggaagtctga 639
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tttatttttagagagcctatcctccatgcataggaagtctga 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 76
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1038
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1028
Effective search space: 646612
Effective search space used: 646612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_j23.g1 MSMg01no484_j23.g1 CHROMAT_FILE:
MSMg01no484_j23.g1 PHD_FILE: MSMg01no484_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:15 2005
(638 letters)
>mm_chr7_88586737_88587770
Length = 1034
Score = 1139 bits (589), Expect = 0.0
Identities = 625/639 (97%), Gaps = 6/639 (0%)
Strand = Plus / Plus
Query: 1 atttaatggaatgagtagattcagtcaggccagtggaaaacaaaatactcgagaaagtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttaatggaatgagtagattcagtcaggccagtggaaaacaaaatactcgagaaagtaa 260
Query: 61 taatcagtctcagaaatggtttcacaattaaagcttctaagttagggaaaactgaatatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatcagtctcagaaatggtttcacaattaaagcttctaagttagggaaaactgaatatg 320
Query: 121 aagaatttcaatatgcagacatttaaaaaacataataggcagaacaaagtggcagaggat 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaatttcaatatgcagacattttaaaaacataataggcagaacaaagtggcagaggat 380
Query: 181 ataaaacacagtatattcaaggagagaagtgttccaacaagaaataaaggctaccctata 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ataaaacacagtatattcaaggagagaagtgtttcaacaagaaataaaggctaccctata 440
Query: 241 aaaagagaacagaatatattaaccattcaagagacagttgaccactcttcttccttcatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaagagaacagaatatattaaccattcaagagacagttgaccactcttcttccttcatg 500
Query: 301 accttccatcatttatggctctttctccttattgctctaagtgtgtgcaaggctcttcta 360
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 501 accttccatcatttatggctctttttccttattgct----gtgtgtgcaaggctcttcta 556
Query: 361 ccttaatcctcctcaatccactgcccattttgtctgcttcgtgactgtcttagtcagggt 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccttaatcttcctcaatccactgcccattttgtctgcttcgtgactgtcttagtcagggt 616
Query: 421 ttctattcctgcacaaacatcatgaccaagaagcaagttgaggatgaaagggtttattta 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 617 ttctattcctgcacaaacatcatgaccaagaagcaagttgaggatgaaagggtttattca 676
Query: 481 gcttacacttccatgttgctgttcatcaccaaaggaagtcaggactggaactcaagcagg 540
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 677 gcttacacttccatgttgctgttcatcaccaaaggatgtcagtactggaactcaagcagg 736
Query: 541 tcaggaagcaggagctgatgcagaggccatggagggatgtt-ctttactggcttgcctcc 599
||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||
Sbjct: 737 tcaggaagcaggagctgatgcagaggccatggagggatgtttctt-actggcttgcttcc 795
Query: 600 cctggcttgttcagcctgctctcttatagaacccaagac 638
|||||||||||||||||||||||||||||||||||||||
Sbjct: 796 cctggcttgttcagcctgctctcttatagaacccaagac 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1034
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1024
Effective search space: 643072
Effective search space used: 643072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
