Query= MSMg01no487_c17.b1 MSMg01no487_c17.b1 CHROMAT_FILE:
MSMg01no487_c17.b1 PHD_FILE: MSMg01no487_c17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:42 2005
(709 letters)
>mm_chr7_150974575_150975683
Length = 1109
Score = 1222 bits (632), Expect = 0.0
Identities = 690/716 (96%), Gaps = 12/716 (1%)
Strand = Plus / Minus
Query: 6 gaattctggaaccatgcaaggcaatcctccaagctagagccttagatgaaataagtagtt 65
|||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 764 gaattctggaaccagggaaggcaaccctccaagctagagccttagatgaaataagtagtt 705
Query: 66 gagctcccaggtctggccttgatgccctaatttttcccacaccagccacatctcctcccc 125
||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| ||
Sbjct: 704 gagctcccaggtctggccttgataccctaatcttccccacaccagccacatctcctctcc 645
Query: 126 cactagcccagctggacctcatcttctggctccagagccactagacccccaccaaaggac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 cactagcccagctggacctcatcttctggctccagagccactagacccccaccaaaggac 585
Query: 186 ccccttctccccaccagccagccttggaagtagcccttcccctgtgtttccctgaggcta 245
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 584 ccccttctccccaccagccagccttggtagtagcccttcccctgtgtttccctgaggcta 525
Query: 246 actgccctttctcagttttcttcaggcaaagccagacctgtgcagattcagatcccagga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 actgccctttctcagttttcttcaggcaaagccagacctgtgcagattcagatcccagga 465
Query: 306 gatgtatccaccctggcctgcccacttatgtcctgggatcgtgggggctttttcagcaac 365
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 464 gatgtatccaccctggcctgcccacttatgtcctgggatcgtgggggctgttccagcaac 405
Query: 366 actgacttctcaggaacaagacgtcaccataacatcacagctggaacagccagcattccc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 actgacttctcaggaacaagacgtcaccataacatcacagctggaacagccagcattccc 345
Query: 426 aggaagctttgtaagcttggtccagtccaaggcctgcaaacagcactggagagcccagcc 485
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 344 aggaagctttgtaagcttggtccagaccaaggcctgcaaacagcactggagagcccagcc 285
Query: 486 tgtgttggctggatgacactattcactgcctactccacccagctccgtgcctgtgtgaat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgtgttggctggatgacactattcactgcctactccacccagctccgtgcctgtgtgaat 225
Query: 546 acctgtgctgctcctga--------gaggcctcgaatgttcctcagctgcctccttagct 597
||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 224 acctgtgctgctcctgagacctgtggaggcctcgaatgttccttagctgcctccttagct 165
Query: 598 cacaggttggaaaagtacagccaaaccccggctcttgttttcagggt----tgtatcttt 653
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 164 cacaggttggaaaagtacagccaaaccccagctcttgttttcagggttgtatgtatcttt 105
Query: 654 tacagccttactccctaccaatctgaccctggtctcagtgtccaacctttctcagt 709
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 104 tacagccttactccctaccaatctgatcctggtctcagtgtccaacctttctcagt 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 709
Length of database: 1109
Length adjustment: 10
Effective length of query: 699
Effective length of database: 1099
Effective search space: 768201
Effective search space used: 768201
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no487_c17.g1 MSMg01no487_c17.g1 CHROMAT_FILE:
MSMg01no487_c17.g1 PHD_FILE: MSMg01no487_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:42 2005
(646 letters)
>mm_chr7_150797305_150798350
Length = 1046
Score = 1156 bits (598), Expect = 0.0
Identities = 634/646 (98%)
Strand = Plus / Plus
Query: 1 ccagcacactacttacagagctgaatattctctcctgaaatcataaaaaaaagatagaca 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ccagcacactacttacagagctgaatattctctcctgaaatcagaaaaaaaagatagaca 260
Query: 61 cagtgagtttagatttactggtacagtggcttcctctgtctgtgtgccaccactgccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtgagtttagatttactggtacagtggcttcctctgtctgtgtgccaccactgccagg 320
Query: 121 cattcactcacctcttttacaatagcaaatgattttgagaatcaaaatgatgacagcgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cattcactcacctcttttacaatagcaaatgattttgagaatcaaaatgatgacagcgcc 380
Query: 181 aatgatgatgatgaaagcagctatgataaccacaatacccagaggcttagagaagcagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgatgatgatgaaagcagctatgataaccacaatacccagaggcttagagaagcagaa 440
Query: 241 acatttttattctgactgtcctggaacgagaaagaagacagctgaggcagagcagacttc 300
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattgagagcctgactgtcctggaacgagaaagaagacagctgaggcagagcagacttc 500
Query: 301 attagagtaacagaccacagaagttcctgcttcatgtctaggttccgagcccatgggctc 360
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 501 attagagtaacagaccacagaagttcctgcttcatgtctaggctctgagcccatgggctc 560
Query: 361 ctgataaggtccttggaaggagcaatgggtgtgcctcactagaacagcagcaggtggctc 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgatgaggtccttggaaggagcaatgggtgtgcctcactagaacagcagcaggtggctc 620
Query: 421 tgctgcccacagactgctgagaacattcaggagtcctggccttgctccttgtgaaatcac 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 tgctgcccacagactgctgagaacattcaggagtcctggcctggctccttgtgaaatcac 680
Query: 481 agcctagggagagcccaggatgcagatacatgggggagagaacaggctagagggaactgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcctagggagagcccaggatgcagatacatgggggagagaacaggctagagggaactgt 740
Query: 541 ggaccccaggctctgtcagctgcagcatgaatagttgagggtcagtgaagccagtctctt 600
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 741 ggaccccaggctctgtcagctgcaacatgaatagttgagggtcagtgaagccagtctctt 800
Query: 601 ccacacaccacacagaactcaacgtaaaggctttcttagtctcaga 646
||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 801 ccacacaccacacagaactcaacctaaaggctttcttagtctcaga 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
