Query= MSMg01no487_e07.b1 MSMg01no487_e07.b1 CHROMAT_FILE:
MSMg01no487_e07.b1 PHD_FILE: MSMg01no487_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:50 2005
(659 letters)
>mm_chr7_112826157_112827215
Length = 1059
Score = 1243 bits (643), Expect = 0.0
Identities = 655/659 (99%)
Strand = Plus / Plus
Query: 1 tggaaaggccagcgatgctgttcgcctcttctgtggccctaacgtaggatacgtgtggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggaaaggccagcgatgctgttcgcctcttctgtggccctaacgtaggatacgtgtggcc 260
Query: 61 ttggaagtctcatgcaattactgatgtcctggaagtccgtgggcacaagctacggggtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggaagtctcatgcaattactgatgtcctggaagtccgtgggcacaagctacggggtca 320
Query: 121 gtttctgcaccccaattatgatcatgtgcaggaggacttggacaagaatgctggaatcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttctgcaccccaattatgatcatgtgcaggaggacttggacaagaatgctggaatcca 380
Query: 181 acaggcacttgctgtacaacagtcactcttggaggtgagagcagaggttggaggaattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaggcacttgctgtacaacagtcactcttggaggtgagagcagaggttggaggaattgg 440
Query: 241 ctgctgactgtttgctcccattacagctgctgacttctgctttacacattgtatttgtcc 300
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgctggctgccagctcccattacagctgctgacttctgctttacacattgtatttgtcc 500
Query: 301 ataggacatgaggcaggaggtgcaggaattctgcaataaacacaagtgggtagaaggcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataggacatgaggcaggaggtgcaggaattctgcaataaacacaagtgggtagaaggcat 560
Query: 361 ctatgagttcctgaaagcctggagctctcagaagctagaggacctgagaggctctcctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctatgagttcctgaaagcctggagctctcagaagctagaggacctgagaggctctcctat 620
Query: 421 taacaattatgtaaatctggtaatccaactgaaaaagtggcaggaacgtgtctccaatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taacaattatgtaaatctggtaatccaactgaaaaagtggcaggaacgtgtctccaatat 680
Query: 481 gtctgtcgaattactgacaaaaggcaagttgctgttcctgagtggccatgatgttcaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtctgtcgaattactgacaaaaggcaagttgctgttcctgagtggccatgatgttcaaga 740
Query: 541 agagttgggtaagtgcttcttgtcctccctatgtcttccctccatacatccatgcacatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agagttgggtaagtgcttcttgtcctccctatgtcttccctccatacatccatgcacatg 800
Query: 601 ggttaccatggggctagaatatcctctaggaagctttgcttcaggtccctctttgtacc 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggttaccatggggctagaatatcctctaggaagctttgcttcaggtccctctttgtacc 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_e07.g1 MSMg01no487_e07.g1 CHROMAT_FILE:
MSMg01no487_e07.g1 PHD_FILE: MSMg01no487_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:50 2005
(509 letters)
>mm_chr7_113263397_113264305
Length = 909
Score = 714 bits (369), Expect = 0.0
Identities = 402/431 (93%), Gaps = 28/431 (6%)
Strand = Plus / Minus
Query: 1 atggcacagtcataaaagaatatccataccagagctgttataaaactttcaataaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atggcacagtcataaaagaatatccataccagagctgttataaaactttcaataaaggat 344
Query: 61 atactctgttgacagaaacatagcagttgaatgctcagaatcatccctctgagagggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atactctgttgacagaaacatagcagttgaatgctcagaatcatccctctgagagggaag 284
Query: 121 gaaatccttaattactggggttttgtttggggaaaggtgtttctgatttagtttggttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gaaatccttaattactggggttttgtttggggaaaggtgtttctgatttagtttggttga 224
Query: 181 ttttgttttggttttatttttccttaatttatttattcattttacatcctgatcttagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttttgttttggttttatttttccttaatttatttattcattttacatcctgatcttagct 164
Query: 241 ccccttcctcctctccttccagtcacacacacacacacacacacacacacacacacacac 300
||||| ||||||||||||||||| |||||||||
Sbjct: 163 cccctccctcctctccttccagt----------------------------cacacacac 132
Query: 301 acacacacacacacacacacacacacacacaccacagcccttccactgaggccatacaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 acacacacacacacacacacacacacacacaccacagcccttccactgaggccatacaag 72
Query: 361 gcaactcagctagggatccaaagggaggcaagagagacaaagttgcccaactgttagggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gcaactcagctagggatccaaagggaggcaagagagacaaagttgcccaactgttagggg 12
Query: 421 acccacatggg 431
|||||||||||
Sbjct: 11 acccacatggg 1
Score = 78.1 bits (40), Expect = 1e-18
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 450 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 489
||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 139
Score = 78.1 bits (40), Expect = 1e-18
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 449 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 488
||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 140
Score = 70.3 bits (36), Expect = 3e-16
Identities = 39/40 (97%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 451 tgtg-tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 489
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 96 tgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 115
Number of extensions: 41
Number of successful extensions: 41
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 7
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
