AGGGAGTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCTTTTCCCACTTAAGTGAGGGGATTAGAATAGATAAA
TGTGAATTTACTCAGCAAGCCCTTGTTAATTGCACTTTCAAGGAAAAGTA
ATTGTGGCAGTAAATCACTGTTAGAGATCTGTTTAAAGATTCATTGTTAT
CCAATGCATTTGCAACAATAGCTTAACTAGTATGAGTATAACAGGCCTTT
ATAAAGATTCTTTAGCCACAGCAATGAAGGAATCAATAAAGGGATGTGAT
GTCATCTTCTGATTTCCAAGTACTCCAGACACACACGTGGTGCTCAAACA
CTCAAGCAAAACAGTTTTCACATAAAATAAAATAAATAATTCTAAAAAAT
AAATTATCAAATGAAGATAGCATTGGCTCCATTAGAACGGGGGTTAGGGT
CAGTTGTGAGCCACCATGTGTGTGCTGGGAACCACTGCAGGTCCTCTGCA
AGAACAGCCATAGTTCTTAACCACTGAGCCATTGTTCCAGTTCATAAAAT
AATTTATATTAACTCACATCTTCAGAGATCTTAAGGGAGCAACCCATGTT
GTGGTCCTGAGGGCAGAATATCCTGACTATGAGAGCTTGCAGAAGAGACT
GCTCCCTTGATGTGTTTAGGAAGCAAAGAGAGCAAAGCACCAGGGCCAAA
CATCCTTCAAAGTCTAATTGCTACTTCCTGCAATAAACCTTACTC

GGGTCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTAGAATGAAAATTAGTAGCT
GCCATGTGCATGCTCTTGGGGGCAGGGATGCACACCTGCTACAGTCAGAC
TGAAGTTATTGATTGACCTGTTTGAAAAACAAAATCCAGAGAGTGAAAAG
TAACAGTACAAAGCTTCTTTTGGGGAAGTCCAGGTACTTTATTCGGTTGC
AAATTAGCAAGGCTCAAGCTCTTTCTCTGGCCTCCTTGTGGGCTGGCTGG
CTTTGAGAATAGCTGGAAGACCACAGGTTCTCTGGGAGTGGAGGCTGTGC
TCTGAATTAACTTTGCTAGGTAATTAAGAATTTTAGCTATCTACAACAGG
AATCTCTAATATTGGAGTTAATATTAGACCAGTCCAAGATTGAGTTAGCT
TGTGTCTCTAGCTACATATGAATCAGAAGATGGCCTAGTTGGCCATCAGT
GGAAAGAGAGGCCTATTGGTCGTGCAAACTTTATATGCCTCAGTACAGGG
GAATACCAGGGCCAAGAAGTGAGAGTGGGTGAGTGGGGGAGTGGGTGAGG
GAGCATGTGGGGGACTTTTNGGGTTGTTTGTTTTTGTTTTTGTGTTTTTG
TTTTTTTTTNNNNNNTTTTNNGTGGNTTNTTGTTGTATTGTGTNTGGTTT
TTTTGTTTTTTTTTTTGTCTATTTTNGTN

Query= MSMg01no488_a07.b1 MSMg01no488_a07.b1 CHROMAT_FILE:
MSMg01no488_a07.b1 PHD_FILE: MSMg01no488_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:48 2005
         (693 letters)



>mm_chr7_61125879_61126971
          Length = 1093

 Score = 1172 bits (606), Expect = 0.0
 Identities = 678/724 (93%), Gaps = 38/724 (5%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcttttcccacttaagtgaggggattagaatagataaatgtgaatttactcagc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gaattctcttttcccacttaagtgaggggattagaatagataaatgtgaatttactcagc 232

                                                                       
Query: 65  aagcccttgttaattgcactttcaaggaaaagtaattgtggcagtaaatcactgttagag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aagcccttgttaattgcactttcaaggaaaagtaattgtggcagtaaatcactgttagag 292

                                                                       
Query: 125 atctgtttaaagattcattgttatccaatgcatttgcaacaatagctt-aactagtatga 183
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 293 atctgtttaaagattcattgttatccaatgcatttgcaacaatagctttaactagtatga 352

                                                                       
Query: 184 gtataa---------------------------------caggcctttataaagattctt 210
           ||||||                                 |||||||||||||||||||||
Sbjct: 353 gtataattagttatcccgtgttaaggcaaaagccagccacaggcctttataaagattctt 412

                                                                       
Query: 211 tagccacagcaatgaaggaatcaataaagggatgtgatgtcatcttctgatttccaagta 270
           |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 413 tagccacagcaatgaaagaatcaataaagggatgtgatgtcatcttctgacctccaagta 472

                                                                       
Query: 271 ctccagacacacacgtggtgctcaaacactcaagcaaaacagttt-tcacataaaataaa 329
           ||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 473 ctccagacacac--gtggtgctcaaacactcaagcaaaaca-tttctcacataaaataaa 529

                                                                       
Query: 330 ataaataattctaaaaaataaattatcaaatgaagatagcattggctccattagaacggg 389
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 530 ataaataattctaaaaaataaattatgaaatgaagatagcattggctccattagaacggg 589

                                                                       
Query: 390 ggttagggtcagttgtgagccaccatgtgtgtgctgggaaccactgcaggtcctctgcaa 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggttagggtcagttgtgagccaccatgtgtgtgctgggaaccactgcaggtcctctgcaa 649

                                                                       
Query: 450 gaacagccatagttcttaaccactgagccattgttccagttcataaaataatttatatta 509
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 650 gaacagccatagttcttaaccactgagccattgttccagttcataaaatgatttatatta 709

                                                                       
Query: 510 actcacatcttcagagatcttaagggagcaacccatgttgtggtcctgagggcagaatat 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 actcacatcttcagagatcttaagggagcaacccatgttgtggtcctgagggcagaatat 769

                                                                       
Query: 570 cctgactatgagagcttgcagaagagactgctcccttgatgtgtttaggaagcaaagaga 629
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| 
Sbjct: 770 cctgactatgagagcttgcagaagagactgctcccttgaggtgtttaggaagcaaagagt 829

                                                                       
Query: 630 gcaaagcaccagggccaaacatccttcaaagtctaattgctacttcctgcaataaacctt 689
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gcaaagcgccagggccaaacatccttcaaagtctaattgctacttcctgcaataaacctt 889

               
Query: 690 actc 693
           ||||
Sbjct: 890 actc 893


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space:   739689
Effective search space used:   739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)