Query= MSMg01no488_j04.b1 MSMg01no488_j04.b1 CHROMAT_FILE:
MSMg01no488_j04.b1 PHD_FILE: MSMg01no488_j04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:32 2005
(625 letters)
>mm_chr7_80602192_80603216
Length = 1025
Score = 1193 bits (617), Expect = 0.0
Identities = 623/625 (99%)
Strand = Plus / Plus
Query: 1 tggaaaaaagaactgttcatgaattataaactcaaagagacacgcaaagaaataaagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggaaaaaagaactgttcatgaattataaactcaaagagacacgcaaagaaataaagctt 260
Query: 61 tgcatgtggaagtcttatgaatgataaggttaatactgaaggccaggcatggcgatgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcatgtggaagtcttatgaatgataaggttaatactgaaggccaggcatggcgatgcac 320
Query: 121 acctttagtctcagtactcaggatgcagaggcagacagatccctgtaagttcaaagccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctttagtctcagtactcaggatgcagaggcagacagatccctgtaagttcaaagccac 380
Query: 181 cagggctacatagagtgatcctgtcttaaaacatacacatacacacacatgactaatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggctacatagagtgatcctgtcttaaaacatacacatacacacacatgactaatact 440
Query: 241 gatatttataaatgtatatatacagtgcagggaaaacaggtacataattatattaacgtt 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatatttagaaatgtatatatacagtgcagggaaaacaggtacataattatattaacgtt 500
Query: 301 ttaaagaatagaatcaatagtcttacactgaaatgtaatgtagagcctggcctctctaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaagaatagaatcaatagtcttacactgaaatgtaatgtagagcctggcctctctaaa 560
Query: 361 tatggttggtatagtacataggtaatagaagtttagtggaggtaagtcaatgtcaagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatggttggtatagtacataggtaatagaagtttagtggaggtaagtcaatgtcaagaag 620
Query: 421 caataagccataacaaggacaggagcatgtataagggaaaaaaggccatgagttacaata 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 caataagccataacaaggacaggagcatgtataagggaaaaaaggccatgcgttacaata 680
Query: 481 agggaggaaatctccaacaacaacaacacaacacaacacaacagtgcacagaatccctta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agggaggaaatctccaacaacaacaacacaacacaacacaacagtgcacagaatccctta 740
Query: 541 gacttgtgtatataaaatgacaacaaccaatactagtacacaggaaactgagttttatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gacttgtgtatataaaatgacaacaaccaatactagtacacaggaaactgagttttatag 800
Query: 601 ggattgcacaaacacttctgcttga 625
|||||||||||||||||||||||||
Sbjct: 801 ggattgcacaaacacttctgcttga 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_j04.g1 MSMg01no488_j04.g1 CHROMAT_FILE:
MSMg01no488_j04.g1 PHD_FILE: MSMg01no488_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:32 2005
(179 letters)
>mm_chr7_80726845_80727423
Length = 579
Score = 321 bits (166), Expect = 1e-92
Identities = 178/184 (96%), Gaps = 5/184 (2%)
Strand = Plus / Minus
Query: 1 attcccaaagcgctcagccagctagcctgatatgcacagttgaaaacagcaaatacaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 attcccaaagcgctcagccagctagcctgatatgcacagttgaaaacagcaaatacaccc 254
Query: 61 tgtccaaagcagggtggaaaaggggggccagcatgtgagtctgcactgacccc-aataca 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 253 tgtccaaagcagggtggaaaaggggggacagcatgtgagtctgcactgacccccaataca 194
Query: 120 caaacacacacacaca----tacacacgggggaggggagagagagggagagagggaggga 175
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 caaacacacacacacacacatacacacgggggaggggagagagagggagagagggaggga 134
Query: 176 gaga 179
||||
Sbjct: 133 gaga 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
