NNNNCCAATTAGTCCTCATGTCGCTAAACGACTCACTATTCAGAGAGGAG
CGCGGAATTCCAAGCTTCCGGAAAAATCACACAGACTCAGCTAGAAATGT
TACTTTATTTTAAAACATATACAGAATAATAAATATTATTGTAAAACTTA
AGAGCCTTTTTTATCTACATAAGGCAATTATAACATGCTATGACTACCTC
TATGAAGGAAAATATAAGCAAGTCTTAGACACTGATAGATATGTGTGTAC
TAACTGGAAACATCTCCCCCACTACATTTATGTGAAAAAGCTTTTACAGA
ACCATCATTTGGCATTCTTTTTATTTTGTTGCTCTCATTATATTCATTTC
ATGAGGAAGTAATAATTATCCTTTTAAAAAGCAAAACCAGGATTACAACT
GAAATGCCACACCTTTAAACTTTCATAAAGTGCAAAATTACTGATGAAAT
GCAAGGCATTGTGACAAAAGAAGCCTTCGGGATGTGTCAAGGGGACTCTT
TGGCGTTAGTGTTTCTGGAGTTCCTGACATCTGCCTGGCATCAGATAACT
GAGTATCATCAGGACTAAGGAACCCTGGTAAGCTGGAAGTTCAGCTTGTC
TCATGAGAAATTCAATGCCACAGAACTGACGGGACACATAGGCTCCACAT
ACAGCACACAACCCAAGCAGACCACAAAGGAACTCATCATTTCATCATAA
TTTGGTCTTCCCATTATTTTTGAAGTCCATGTT

NNAACGATGAAGTGNGAGGTCTGGNGGNCGCCTGTTTTCAAACTAGGGTG
AACNANAGAAGGTTCAAAAAAAGGGCACCTGAGGAATACCCAATGGCTGA
GAAACACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGAAGATGTGGAGAAAGGAATAT
TTCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCA
GTCTGGTGGTTCCTCTGATAATTGGACATAGTACTACCAGAGGATCCCGC
AATACCTCTCCTGAGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGG
ACACATGCTCCACTACCCCCATAGCAGCCTTATTTATAATAGCCAGAAGC
TGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTG
GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA
TGAAATTCCTAGGCAAATAGATGGACTTGGAGGGCATCATCCTGAGTGAG
GTAACTCAATGACAAAAGAACTCACAAGATATGTACTCACTGATAAGTGG
ATATTAGCCCAGAAACTTAGAATACCCAAGATATAAGATACAATTTATAA
AACACATGAAACTCAAGAAGAATGAAGACCAAAATGTGGACACTT

Query= MSMg01no489_l11.b1 MSMg01no489_l11.b1 CHROMAT_FILE:
MSMg01no489_l11.b1 PHD_FILE: MSMg01no489_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:03 2005
         (657 letters)



>mm_chr7_63228651_63229708
          Length = 1058

 Score = 1205 bits (623), Expect = 0.0
 Identities = 647/655 (98%), Gaps = 1/655 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattccaagcttccggaaaaatca-cacagactcagctagaaatgttactttattttaa 62
           ||||||||||| |  |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccaagcatagggaaaaatcaacacagactcagctagaaatgttactttattttaa 263

                                                                       
Query: 63  aacatatacagaataataaatattattgtaaaacttaagagccttttttatctacataag 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aacatatacagaataataaatattattgtaaaacttaagagccttttttatctacataag 323

                                                                       
Query: 123 gcaattataacatgctatgactacctctatgaaggaaaatataagcaagtcttagacact 182
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 gcaattataacatgctatgactacttctatgaaggaaaatataagcaagtcttagacact 383

                                                                       
Query: 183 gatagatatgtgtgtactaactggaaacatctcccccactacatttatgtgaaaaagctt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gatagatatgtgtgtactaactggaaacatctcccccactacatttatgtgaaaaagctt 443

                                                                       
Query: 243 ttacagaaccatcatttggcattctttttattttgttgctctcattatattcatttcatg 302
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 444 ttacagaaccatcatttggcattctttttaatttgttgctctcattatattcatttcatg 503

                                                                       
Query: 303 aggaagtaataattatccttttaaaaagcaaaaccaggattacaactgaaatgccacacc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggaagtaataattatccttttaaaaagcaaaaccaggattacaactgaaatgccacacc 563

                                                                       
Query: 363 tttaaactttcataaagtgcaaaattactgatgaaatgcaaggcattgtgacaaaagaag 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttaaactttcataaagtgcaaaattactgatgaaatgcaaggcattgtgacaaaagaag 623

                                                                       
Query: 423 ccttcgggatgtgtcaaggggactctttggcgttagtgtttctggagttcctgacatctg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccttcgggatgtgtcaaggggactctttggcgttagtgtttctggagttcctgacatctg 683

                                                                       
Query: 483 cctggcatcagataactgagtatcatcaggactaaggaaccctggtaagctggaagttca 542
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 684 cctggcatcagataactgagtatcatcaggactaaggtaccctggtaagctggaagttca 743

                                                                       
Query: 543 gcttgtctcatgagaaattcaatgccacagaactgacgggacacataggctccacataca 602
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 744 gcttgtctcatgagaaattcaatgccacagaactgatgggacacataggctccacataca 803

                                                                  
Query: 603 gcacacaacccaagcagaccacaaaggaactcatcatttcatcataatttggtct 657
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gcacacaacccaagcagaccacaaaggaactcatcatttcatcataatttggtct 858


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1058
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1048
Effective search space:   678056
Effective search space used:   678056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)