Query= MSMg01no490_p08.b1 MSMg01no490_p08.b1 CHROMAT_FILE:
MSMg01no490_p08.b1 PHD_FILE: MSMg01no490_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:42 2005
(314 letters)
>mm_chr7_95999759_96000472
Length = 714
Score = 561 bits (290), Expect = e-164
Identities = 308/314 (98%)
Strand = Plus / Plus
Query: 1 acagtgtcccaacataaagtcataatttttctgtcttatttccatttctccaagaagcct 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 acagtgtcccaacataaagtcataatttttctgccttatttccatttctccaagaagcct 260
Query: 61 tgattcttttaaatgagaataatatttaccgctgataacctaagctcaaggtgtttgcac 120
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tgattcttttaaatgagaataatatttagtgctgataacctaagctcaaggtgtttgcac 320
Query: 121 tgatattgatactatctcagtgattatcagtaaagagtgcacaagtactcttaaaatcct 180
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||
Sbjct: 321 tgatattgatactatctcagtgattaactgtaaagagtgcacaagtactcttaaaattct 380
Query: 181 tgcccaagatgatgatgcactaattttagaattactgtgccatgctacctactcaccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcccaagatgatgatgcactaattttagaattactgtgccatgctacctactcaccaga 440
Query: 241 attcaacatgatttgaacaacttgcttagccaagttatgttcagtaaaatgtagaactcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcaacatgatttgaacaacttgcttagccaagttatgttcagtaaaatgtagaactcc 500
Query: 301 taggtttaagaagt 314
||||||||||||||
Sbjct: 501 taggtttaagaagt 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_p08.g1 MSMg01no490_p08.g1 CHROMAT_FILE:
MSMg01no490_p08.g1 PHD_FILE: MSMg01no490_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:42 2005
(215 letters)
>mm_chr7_96185533_96186147
Length = 615
Score = 350 bits (181), Expect = e-101
Identities = 205/217 (94%), Gaps = 8/217 (3%)
Strand = Plus / Minus
Query: 1 ctgaaccaaatgcattcaactcttctcatcacctgaccctagagatccagatgctcttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ctgaaccaaatgcattcaactcttctcatcacctgaccctagagatccagatgctcttag 354
Query: 61 tgatgggcagatgagggataaacacagtgttcaccatggcaacacagagctatgtgcaca 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgatgggcagaggagggataaacacagtgttcaccatggcaacacagagctatgtgcaca 294
Query: 121 gagatgataggggattccaagaaggaggggagagtgttggtttttg----tagcggatgg 176
|||||||||||||||||||||||||| |||||||| ||||| | ||| ||||||
Sbjct: 293 gagatgataggggattccaagaaggaagggagagtattggt----gagggtagtggatgg 238
Query: 177 agagaggtggagacaggaggaagggggaaagggatga 213
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 agagaggtggagacaggaggaagggggaaagggatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
