Query= MSMg01no491_g05.b1 MSMg01no491_g05.b1 CHROMAT_FILE:
MSMg01no491_g05.b1 PHD_FILE: MSMg01no491_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:17 2005
(248 letters)
>mm_chr7_29697646_29698293
Length = 648
Score = 445 bits (230), Expect = e-129
Identities = 242/246 (98%), Gaps = 2/246 (0%)
Strand = Plus / Plus
Query: 1 aggctggatgcaggtgttcctctgacacccccaactcttgagttctctccatctccaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggctggatgcaggtgttcctctgacacccccaactcttgagttctctccatctccaggg 260
Query: 61 tcccttcccacaccagagcagctcaggagtaccatcattct-ctagatgtctggcccata 119
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||
Sbjct: 261 tcccttcccacaccagagcagctcaggagtaccatcattctgc-agatgtctggcccgta 319
Query: 120 actctgcaaccccgtaactctgcaaccccatcagcctagtatgccacagatggctggttg 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 actctgcaaccccataactctgcaaccccatcagcctagtatgccacagatggctggttg 379
Query: 180 ctttggacatggtcccctgcctttcccaagaggccagaacttcagctttgtgtaagcaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctttggacatggtcccctgcctttcccaagaggccagaacttcagctttgtgtaagcaaa 439
Query: 240 taaaga 245
||||||
Sbjct: 440 taaaga 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no491_g05.g1 MSMg01no491_g05.g1 CHROMAT_FILE:
MSMg01no491_g05.g1 PHD_FILE: MSMg01no491_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:17 2005
(249 letters)
>mm_chr7_29887764_29888407
Length = 644
Score = 406 bits (210), Expect = e-118
Identities = 238/250 (95%), Gaps = 7/250 (2%)
Strand = Plus / Minus
Query: 1 aagctctatgaagatcaatatcttactgtatatgtcccaggagccttaattttaggataa 60
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 444 aagctctatgaagatcaatatcttactgtatatatcccaggagccttagttttaggataa 385
Query: 61 cccatgggaacctttgctcacacagc-ctctaatattgggcccccacaggatgtcttaat 119
|||||| ||| ||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 384 cccatgagaatctttgctcacaca-cactctaatattgggcccccacaggatgtcttaat 326
Query: 120 agccacaacttgtggcaatactactgcttttgtgggacctttgacctttgaccctttcct 179
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 325 agccacaacttgtggcaatactattgcttttgtgggacctttgacctttgac-----cct 271
Query: 180 ggtgacttgttgtagggcatgtggcacgcccagtgacttctccgggacaacacctcttgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ggtgacttgttgtagggcatgtggcacgcccagtgacttctccgggacaacacctcttgg 211
Query: 240 ccccggagga 249
||||||||||
Sbjct: 210 ccccggagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 644
Length adjustment: 9
Effective length of query: 240
Effective length of database: 635
Effective search space: 152400
Effective search space used: 152400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
