Query= MSMg01no492_l22.b1 MSMg01no492_l22.b1 CHROMAT_FILE:
MSMg01no492_l22.b1 PHD_FILE: MSMg01no492_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:03 2005
(572 letters)
>mm_chr7_74970574_74971542
Length = 969
Score = 967 bits (500), Expect = 0.0
Identities = 550/568 (96%), Gaps = 3/568 (0%)
Strand = Plus / Minus
Query: 5 gaattctgctgtgattacgtcaaggagagggctgtgtgggctggatgtccactctttagt 64
|||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 769 gaattctgctgtgagcaggtcaaggagagggctgtgtgggctgggtgtccactctttagt 710
Query: 65 gagtggaatgtgaggctaatcggaaaagctcgcaggtttctgtaggggcgttaaacactt 124
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 709 gagtggaatatgaggctaatcggaaaagctcacaggtttctgtaggggcgttaaacactt 650
Query: 125 tgtcgactcgtgggatctgactcacaaacacatcatgccagcatcagagttacattagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tgtcgactcgtgggatctgactcacaaacacatcatgccagcatcagagttacattagag 590
Query: 185 ccagtcgtagctttggaagctgaggtgggaaagaggggtgttaactttctctggctactg 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 589 ccagtcgtagctttggaagctgaggtgggaaagaggggtgttatctttctctggctactg 530
Query: 245 gtggggtatggtaagcaagccctgcattctccagcccatgagactcaacatgaagtcatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gtggggtatggtaagcaagccctgcattctccagcccatgagactcaacatgaagtcatt 470
Query: 305 gcctgcatttgtactgtgactgtgactccagataaaactacagaaaggttttctcatgcc 364
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 469 gcctgcatttgtactgtgactgtgactccggataaaactacggagaggttttctcatgcc 410
Query: 365 aagtggacatattgcaaaatagggttcattatgttaagtcggtgcctacctgtgtctgga 424
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 409 aagtggacatattgcacaatagggttcattatgttaagtcagtgcctacctgtgtctgga 350
Query: 425 ttcagtagctagtgccagtgctgtcgtaaagtgggtgctgactgtgcattttcctgacaa 484
|||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 349 ttcagtagctagcgccagtgctgtggtaaagtgg---ctgactgtgcattttcctgacaa 293
Query: 485 ggggggatctgtgaatctgaaagatggcggcataagaagctctaagcagacccggaatag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ggggggatctgtgaatctgaaagatggcggcataagaagctctaagcagacccggaatag 233
Query: 545 tatgagtgtcaagacggtgaggagtcat 572
| ||||||||||||||||||||||||||
Sbjct: 232 tgtgagtgtcaagacggtgaggagtcat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 969
Length adjustment: 10
Effective length of query: 562
Effective length of database: 959
Effective search space: 538958
Effective search space used: 538958
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_l22.g1 MSMg01no492_l22.g1 CHROMAT_FILE:
MSMg01no492_l22.g1 PHD_FILE: MSMg01no492_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:03 2005
(644 letters)
>mm_chr7_74781192_74782235
Length = 1044
Score = 1232 bits (637), Expect = 0.0
Identities = 643/645 (99%), Gaps = 1/645 (0%)
Strand = Plus / Plus
Query: 1 tgccagaaactatgacatttacagaaaagttctttaaaatattttctaatgtaaatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccagaaactatgacatttacagaaaagttctttaaaatattttctaatgtaaatttta 260
Query: 61 ctgcccaaaatcataatgtttcctatctacttttgtcttgtatagttctggttttatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgcccaaaatcataatgtttcctatctacttttgtcttgtatagttctggttttatttt 320
Query: 121 ggtttgatttggtttggatttgaaatagggtctttctatacagtctgaccccaaatgcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtttgatttggtttggatttgaaatagggtctttctatacagtctgaccccaaatgcat 380
Query: 181 gaccctcctacctcagcctcccaagtaatgatgtcataggactaatatgctcacccctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaccctcctacctcagcctcccaagtaatgatgtcataggactaatatgctcacccctaa 440
Query: 241 ctattcttgtattcaccccttaattatataattgggttcctacataaatcagctcatatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctattcttgtattcaccccttaattatataattgggttcctacataaatcagctcatatt 500
Query: 301 acattgaaaaaaagttgaacaatttcctatatacaaataaagataacactatatgatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acattgaaaaaaagttgaacaatttcctatatacaaataaagataacactatatgatgga 560
Query: 361 atactactgcaaagtattttaaaataaacttatctaccttttgccccagcagtcatccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atactactgcaaagtattttaaaataaacttatctaccttttgccccagcagtcatccct 620
Query: 421 ttatctgcctgagaacctcctaaacgtaagtgtatccatgcacaaagtcaattctatcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttatctgcctgagaacctcctaaacgtaagtgtatccatgcacaaagtcaattctatcta 680
Query: 481 ctaacctagaatattaaagaaaaaaaaagaatttgaagcaaattatatagacgatgaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctaacctagaatattaaagaaaaaaaaagaatttgaagcaaattatatagacgatgaatc 740
Query: 541 tgtttttattattaagaaaggaaaaa-caaagaaatatagtagagttatagaaataaaag 599
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 tgtttttattattaagaaaggaaaaaacaaagaaatatagtagagttatagaaataaaag 800
Query: 600 caagggaatggaaggtactgcagtttgaatgctgcatctaaccta 644
|||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 801 caagggaatggaaggtgctgcagtttgaatgctgcatctaaccta 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
