Query= MSMg01no492_n22.b1 MSMg01no492_n22.b1 CHROMAT_FILE:
MSMg01no492_n22.b1 PHD_FILE: MSMg01no492_n22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:13 2005
(564 letters)
>mm_chr7_66028552_66029515
Length = 964
Score = 1036 bits (536), Expect = 0.0
Identities = 557/564 (98%)
Strand = Plus / Minus
Query: 1 tagtacatacacattagagaaacctaggctctggtctaaaaggctcttgttcatctgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tagtacatacacattagagaaacctaggctctggtctaaaaggctcttgttcatctgctt 705
Query: 61 cacacccatagtagagaaaccatcatggactctggctagagtttctacagaatgccacac 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cacacccatagtagggaaaccatcatggactctggctagagtttctacagaatgccacac 645
Query: 121 ggccagtgcttaatgcatgctttctcattttaataccaaacaataactaactgttttaac 180
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 644 agccagtgcttaatgcatgttttctcattttaataccaaacaataactaattgttttaac 585
Query: 181 tatgatcagacttgtggatagtgagatgaaatgattagttctaatgcaaaatcagaggct 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tatgaacagacttgtggatagtgagatgaaatgattagttctaatgcaaaatcagaggct 525
Query: 241 gagataacagaaaaggaggcaccagcaaggaaaaggaatgggtgtggtttcccgagacac 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 524 gagataacagaaaaggaggcaccagcaaggaaaagggatgggtgtggtttcccgagacac 465
Query: 301 ataagagcctttctaattcttcatagcaatttagaggagtaattcctacttggaaatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ataagagcctttctaattcttcatagcaatttagaggagtaattcctacttggaaatatg 405
Query: 361 aatttgtgctaaaatcccatttgctcgatgtgctctaaagattcttccttgacctttgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aatttgtgctaaaatcccatttgctcgatgtgctctaaagattcttccttgacctttgcc 345
Query: 421 agaaagaatttaaatagccatgtatgagcaaagagctcagcgccttcaccatgactgtgc 480
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agaaagaatttaaatagccacgtatgagcaaagagctcagcgccttcaccatgactgtgc 285
Query: 481 tgtaaaagaaatggcaactcactgtaaagagaatgtttagatctttccattggtggaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgtaaaagaaatggcaactcactgtaaagagaatgtttagatctttccattggtggaaaa 225
Query: 541 gatggcgcctcctccaaagaggta 564
||||||||||||||||||||||||
Sbjct: 224 gatggcgcctcctccaaagaggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_n22.g1 MSMg01no492_n22.g1 CHROMAT_FILE:
MSMg01no492_n22.g1 PHD_FILE: MSMg01no492_n22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:13 2005
(586 letters)
>mm_chr7_65858700_65859685
Length = 986
Score = 1035 bits (535), Expect = 0.0
Identities = 574/587 (97%), Gaps = 2/587 (0%)
Strand = Plus / Plus
Query: 1 ttatatatgttggatattagtcccctatctgatttaggataggtaaagatcctttcccaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatatatgttggatattagtctcctatctgatttaggataggtaaagatcctttcccaa 260
Query: 61 tctgttggtggtctatttgtcttattgacggtgtcttttgccttgcagaagcttttgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 tctgttggtggtctatttgtcttattgacggtgtcttttgccttgcagaagctttggagt 320
Query: 121 ttcatgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgttctattc 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 ttcatgaggtcccatttgtcaattctcaatcttacagcacaagccattgctgttctattc 380
Query: 181 aggaatttttctcctgtgcccatatcttcaaggcttttccccactttctcctctataagt 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaatttttcccctgtgcccatatcttcaaggcttttccccactttctcctctataagt 440
Query: 241 ttttttgtctctggttttatgtgaagtt-ctttgatccacttagatttgaccttagtaca 299
|| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 441 ttcagtgtctctggttttatgtgaagttccttt-atccacttagatttgaccttagtaca 499
Query: 300 aggagataggtatggatagattcttaactgcatttttgacacaactctttgatgactagt 359
||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 500 aggagataggtatggatcgattcttagctgcatttttgacacaagtctttgatgactagt 559
Query: 360 aatcaataaaagacgtaataatctattatattgggggaaaattgtgtggaaattgaaaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aatcaataaaagacgtaataatctattatattgggggaaaattgtgtggaaattgaaaaa 619
Query: 420 gagttatacacaaagggggataaagcttttaacttaagcccgttaaattttctcttttct 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 620 gagttatacacaaagggggataaagcttttaacttaagcccgttaaattttctcttttgt 679
Query: 480 ttcatatctctatgtttttaatggtgctgcattttcaaaaactatattattattactaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttcatatctctatgtttttaatggtgctgcattttcaaaaactatattattattactaga 739
Query: 540 atgtagtagtccagcaggatggcttagagaattaatgactaaggtgt 586
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atgtagtagtccagcaggatggcttagagaattaatgactaaggtgt 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
