Query= MSMg01no493_o09.b1 MSMg01no493_o09.b1 CHROMAT_FILE:
MSMg01no493_o09.b1 PHD_FILE: MSMg01no493_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:36 2005
(372 letters)
>mm_chr7_139428553_139429326
Length = 774
Score = 659 bits (341), Expect = 0.0
Identities = 365/379 (96%), Gaps = 12/379 (3%)
Strand = Plus / Minus
Query: 1 gaacagtggaaaaggaaggaagtgaagcccttcccatttgtggggggtcactggagagtg 60
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 574 gaacagtggaaaaggaaggaagtgaagccctccccatttgt-gggggtcactggagagtg 516
Query: 61 tggggatgtttttggttctggctggttacaggctcccccctgtcttcctgttggaggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tggggatgtttttggttctggctggttacaggctcccccctgtcttcctgttggaggaat 456
Query: 121 ctttatccacattctctgtcatgtgcagccaaagttctgtaactcactaagggggagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 455 ctttatccacattctctgtcatgtgcagccaaagttctgtaactcactaagggtgagtct 396
Query: 181 caagacacccttagaatgtcctcagaaacacatctcacaaactaagctcgggccacatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 caagacacccttagaatgtcctcagaaacacatctcacaaactaagctcgggccacatgt 336
Query: 241 ggtgtcactaggagatagctttgatttttatgaacctttccaggcctgctagcagcttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggtgtcactaggagatagctttgatttttatgaacctttccaggcctgctagcagcttgg 276
Query: 301 ttcgcaaaggatatgctgaaagtcttgtcatttttttt-------aaaaaagaccccagg 353
|||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 275 ttcgcaaaggatatgctgaaagtcttgtca----ttttaaaaaaaaaaaaagaccccagg 220
Query: 354 gaataccagagagaacaac 372
|||||||||||||||||||
Sbjct: 219 gaataccagagagaacaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 774
Length adjustment: 9
Effective length of query: 363
Effective length of database: 765
Effective search space: 277695
Effective search space used: 277695
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_o09.g1 MSMg01no493_o09.g1 CHROMAT_FILE:
MSMg01no493_o09.g1 PHD_FILE: MSMg01no493_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:36 2005
(623 letters)
>mm_chr7_139280610_139281632
Length = 1023
Score = 1129 bits (584), Expect = 0.0
Identities = 614/626 (98%), Gaps = 5/626 (0%)
Strand = Plus / Plus
Query: 1 tctgctggatctgctcaagactattttaaggccagagaagatgtcagcaccaatttatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tctgctggatctgctcaagactattttaaggccagagaagatgtcagcaccaatttatca 259
Query: 61 gcaaagaaactaaggcacagaattgtcagcggccacgacattctgaataccagagtggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttaaagaaactaaggcacagaattgtcagcggccacgacattctgaataccagagtggat 319
Query: 121 attggactctacaggcttcgtcgagatgttcctgtacttttacctaaaagaacaggcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attggactctacaggcttcgtcgagatgttcctgtacttttacctaaaagaacaggcaga 379
Query: 181 aaatggaagcaggcgagagccaatgcagtttgtagaatgtggctcagttactaactgagc 240
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 380 aaatggaagcaggcgagagccgatgcagtttgtagaacgtggctcagttactaactgagc 439
Query: 241 atgcattgacatgcatggccaacggctactgggaacataatgtatatatttggagacaat 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgcattgacatgcatggccaatggctactgggaacataatgtatatatttggagacaat 499
Query: 301 ttattttcaaaagcttggatatccatgaacattcatgtgttttgtatgcttaccagaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttattttcaaaagcttggatatccatgaacattcatgtgttttgtatgcttaccagaaac 559
Query: 361 tgtgttgcttctttttcctttttttttttccctttgaaatggggcttcatgtaaccaaac 420
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 560 tgtgttgcttctttttcctttttttttt--cctttgaactggggcttcatgtaaccaaac 617
Query: 421 tggcttgga---cactgtgcagctggggatggcagaactttgaattctcctgcctccacc 477
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tggcttggaactcactgtgcagctggggatggcagaactttgaattctcctgcctccacc 677
Query: 478 tccttagtggggttagaggcactaacccctgtgcctaactccaaagctgttttttacaga 537
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tccttagaggggttagaggcactaacccctgtgcctaactccaaagctgttttttacaga 737
Query: 538 gtatgaactgcagctcagaccttgccagtgttatggtagaagccacatttattgacactg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gtatgaactgcagctcagaccttgccagtgttatggtagaagccacatttattgacactg 797
Query: 598 gatcaaatacttgtccacatcagggg 623
||||||||||||||||||||||||||
Sbjct: 798 gatcaaatacttgtccacatcagggg 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
