Query= MSMg01no493_p01.b1 MSMg01no493_p01.b1 CHROMAT_FILE:
MSMg01no493_p01.b1 PHD_FILE: MSMg01no493_p01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:39 2005
(450 letters)
>mm_chr7_47173056_47173904
Length = 849
Score = 832 bits (430), Expect = 0.0
Identities = 442/446 (99%), Gaps = 1/446 (0%)
Strand = Plus / Minus
Query: 5 gaattctttagctcttctctgtatctgcatcatttattatcttttagaaatgctttagcc 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gaattctttagc-caactctgtatctgcatcatttattatcttttagaaatgctttagcc 591
Query: 65 atgagcagaaagtgtttacaaagtcaccctatgtattcctttcatggctgtggtaagcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 atgagcagaaagtgtttacaaagtcaccctatgtattcctttcatggctgtggtaagcaa 531
Query: 125 acaggcatgtttatggggcactgagcatccctgaaagagagtccttacaggagcagcttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 acaggcatgtttatggggcactgagcatccctgaaagagagtccttacaggagcagcttc 471
Query: 185 ccccaaacccaaaggagaaagccaaggccaaaaggaagtgattctacctctagatactga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ccccaaacccaaaggagaaagccaaggccaaaaggaagtgattctacctctagatactga 411
Query: 245 gctgtcaccacgctgacaaacccatacatcatctccattggcttgagacccagacttctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gctgtcaccacgctgacaaacccatacatcatctccattggcttgagacccagacttctt 351
Query: 305 tgctccccttagttattttcagttaaaataaaaatctaaggaaacctcagtgggacaatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgctccccttagttattttcagttaaaataaaaatctaaggaaacctcagtgggacaatt 291
Query: 365 aactcccaaatatatgaaatgctttgggaaagcatgttttttttcaaaacaagtcttttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aactcccaaatatatgaaatgctttgggaaagcatgttttttttcaaaacaagtcttttc 231
Query: 425 ctgcacagggcacacgctctatctca 450
||||||||| ||||||||||||||||
Sbjct: 230 ctgcacaggacacacgctctatctca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 849
Length adjustment: 10
Effective length of query: 440
Effective length of database: 839
Effective search space: 369160
Effective search space used: 369160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_p01.g1 MSMg01no493_p01.g1 CHROMAT_FILE:
MSMg01no493_p01.g1 PHD_FILE: MSMg01no493_p01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:39 2005
(663 letters)
>mm_chr7_47028206_47029268
Length = 1063
Score = 1282 bits (663), Expect = 0.0
Identities = 663/663 (100%)
Strand = Plus / Plus
Query: 1 ctctttagcaaagctctttggaatggagcacagagatatgagcatatgaaatggcctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctttagcaaagctctttggaatggagcacagagatatgagcatatgaaatggcctgag 260
Query: 61 ggagcctctccccacagtctaccaaagcaatcaagccccacgctaagctctggggggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagcctctccccacagtctaccaaagcaatcaagccccacgctaagctctggggggctt 320
Query: 121 catagacacactgctaaattcaatgtcagcctgtgacatactgtgtacagtatacctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catagacacactgctaaattcaatgtcagcctgtgacatactgtgtacagtatacctctt 380
Query: 181 cctgctctgtctctgtcatttcttgaagacacctatcaaactaattgcaggctaagggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgctctgtctctgtcatttcttgaagacacctatcaaactaattgcaggctaagggaa 440
Query: 241 gaaatcgcattacactttataatgggctaattaggtaaatatgttagaaagtgctcccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaatcgcattacactttataatgggctaattaggtaaatatgttagaaagtgctcccca 500
Query: 301 tagggccatttcttggttgtgctgttggtactcagcacttgtcttccatgtgtcagaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagggccatttcttggttgtgctgttggtactcagcacttgtcttccatgtgtcagaaca 560
Query: 361 tcagaagcaaagctgctcgctttctccgttatgtcatactaatgaaatgagttgagtagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagaagcaaagctgctcgctttctccgttatgtcatactaatgaaatgagttgagtagt 620
Query: 421 gcatgggaagtacccggccctcatgattactgcagttcttggaagggatatattgtgtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcatgggaagtacccggccctcatgattactgcagttcttggaagggatatattgtgtct 680
Query: 481 aggaatacgaattaagtattgattgtctgagccttgcaagcagatgtagaaacattagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggaatacgaattaagtattgattgtctgagccttgcaagcagatgtagaaacattagag 740
Query: 541 agaaccttctggtcccccgtagagagtttcttggcttcgatcagctgtttgtgggccagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaaccttctggtcccccgtagagagtttcttggcttcgatcagctgtttgtgggccagc 800
Query: 601 tgatcagctctggaagtccctgttgcagcctcctctgactgactctggatctccatgctc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgatcagctctggaagtccctgttgcagcctcctctgactgactctggatctccatgctc 860
Query: 661 acc 663
|||
Sbjct: 861 acc 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
