Query= MSMg01no493_p07.b1 MSMg01no493_p07.b1 CHROMAT_FILE:
MSMg01no493_p07.b1 PHD_FILE: MSMg01no493_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:40 2005
(590 letters)
>mm_chr7_146407434_146408423
Length = 990
Score = 1104 bits (571), Expect = 0.0
Identities = 583/587 (99%), Gaps = 1/587 (0%)
Strand = Plus / Plus
Query: 5 gaattctggtgtttacctttttctacagtgcaggatcctagccctgggaatggtgctgcc 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctggtgttcacctttttctacagtgcaggatcctagccctgggaatggtgctgcc 263
Query: 65 cactagtgggggggggg-tctttctacttcatttagccttatcacaatactctctccacc 123
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 264 cactagtgggggggggggtctttctacttcatttagccttatcacaatactttctccacc 323
Query: 124 cccataggctgtctccaagttccttatagatctcaggcctgttctcaggtagagagaggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cccataggctgtctccaagttccttatagatctcaggcctgttctcaggtagagagaggg 383
Query: 184 gttaacactgttaccagactaagctttgcataataaatagagcacagcctaacaaaacct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttaacactgttaccagactaagctttgcataataaatagagcacagcctaacaaaacct 443
Query: 244 ctgcatgcggcagcatgtggcctagctttccgtggggccagtcccctcttgagtctgagc 303
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 444 ctgcatgcggcagcatgtggcctagctttccatggggccagtcccctcttgagtctgagc 503
Query: 304 tgctttgtttcagtgccctccttgggactgaatgtcagttcctgagtggatgtgtggggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgctttgtttcagtgccctccttgggactgaatgtcagttcctgagtggatgtgtggggc 563
Query: 364 catcactccctctgctgcaaatgaggccatgcttgtctccttcacaccttgatatgtctt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catcactccctctgctgcaaatgaggccatgcttgtctccttcacaccttgatatgtctt 623
Query: 424 agtctccactcactcttatcttcgtctatctgaggttgctttgctttcttcttctttcag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtctccactcactcttatcttcgtctatctgaggttgctttgctttcttcttctttcag 683
Query: 484 ctttgttgagttggaaatttggggtttgacttcagtccctcttctctaacggacatttga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctttgttgagttggaaatttggggtttgacttcagtccctcttctctaacggacatttga 743
Query: 544 actgccctttatcctaaagcctgccttgatttgtggtgtccagcttg 590
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 actgccctttatcctaaagcctgccttgatttgtggtgtccagcttg 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_p07.g1 MSMg01no493_p07.g1 CHROMAT_FILE:
MSMg01no493_p07.g1 PHD_FILE: MSMg01no493_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:40 2005
(119 letters)
>mm_chr7_146557662_146558180
Length = 519
Score = 223 bits (115), Expect = 4e-63
Identities = 118/119 (99%)
Strand = Plus / Minus
Query: 1 atttgagttagagacaagtcatgggtagagcgaatacgccagccagttgatagatcaggg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atttgagtcagagacaagtcatgggtagagcgaatacgccagccagttgatagatcaggg 260
Query: 61 tgttttggtaaaaaggactgtcacccaagtgggggcagccgttcaacctgagggcaggt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgttttggtaaaaaggactgtcacccaagtgggggcagccgttcaacctgagggcaggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
