Query= MSMg01no494_o05.b1 MSMg01no494_o05.b1 CHROMAT_FILE:
MSMg01no494_o05.b1 PHD_FILE: MSMg01no494_o05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:50 2005
(418 letters)
>mm_chr7_35233133_35233949
Length = 817
Score = 698 bits (361), Expect = 0.0
Identities = 397/419 (94%), Gaps = 19/419 (4%)
Strand = Plus / Plus
Query: 1 atgtatccttggctaggacagatgaccaggctactagagagaccctgtctcaaaacaaca 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 195 atgtatccttggctaggacagatgaccaggctaccagagagaccctgtctcaaaacaaca 254
Query: 61 ataataacaaaactacagggctgaataagagtcctttcttttctttctttctttctttct 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ataacaacaaaactacagggctgaataagagtcctttcttttctttctttctttctttct 314
Query: 121 tt------ttttttttagaaataagagaagattttttcagactgagccctaagccacttc 174
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttctttttttttttttagaaataagagaagattttttcagactgagccctaagccacttc 374
Query: 175 ctagttagaagcagaagagggtctatgggggccgcaaagtggaagaaaccaggaaaaaac 234
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 375 ctagttagaagcagaagagggtctatgggggccccaaagtggaagaaaccaggaaaaaac 434
Query: 235 agaaatgaaaccagtttttt------gtgagctggcaactcactgtgcaaggatccatga 288
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 435 agaaatgaaaccag------cacacagtgagctggcaactcactgtgcaaggatccatga 488
Query: 289 gtcagacgctgctgactgatagaggaggtgagttccgagccatctgagcccttggtgact 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtcagacgctgctgactgatagaggaggtgagttccgagccatctgagcccttggtgact 548
Query: 349 ttttgcctcagcttacccccatgttttaagcacatgctaatattcttggagaggggggg 407
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 549 ttttgcctcagcttacccccatgttttaagcacatgctaatattcttggag-ggggggg 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 817
Length adjustment: 9
Effective length of query: 409
Effective length of database: 808
Effective search space: 330472
Effective search space used: 330472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_o05.g1 MSMg01no494_o05.g1 CHROMAT_FILE:
MSMg01no494_o05.g1 PHD_FILE: MSMg01no494_o05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:50 2005
(155 letters)
>mm_chr7_35441882_35442436
Length = 555
Score = 284 bits (147), Expect = 1e-81
Identities = 153/155 (98%)
Strand = Plus / Minus
Query: 1 gcttacccttcgtgacgcacacagagctcagccattcgatgagagatgatagacggtgga 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 355 gcttacccttcgtgacgcacacagagctcagccattcgatgagagacgatagacggtgga 296
Query: 61 gacaaagaccgggagcatcaaggaaataaaggtccttcaaaatggtcagcccttgttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gacaaagaccgggagcatcaaggaaataaaggtccttcaaaatggtcagcccttgttctg 236
Query: 121 attaaattgcgcatttttaatatagttggtatcaa 155
||||||||| |||||||||||||||||||||||||
Sbjct: 235 attaaattgtgcatttttaatatagttggtatcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 555
Length adjustment: 8
Effective length of query: 147
Effective length of database: 547
Effective search space: 80409
Effective search space used: 80409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
