Query= MSMg01no497_a22.b1 MSMg01no497_a22.b1 CHROMAT_FILE:
MSMg01no497_a22.b1 PHD_FILE: MSMg01no497_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:36 2005
(187 letters)
>mm_chr7_143905274_143905859
Length = 586
Score = 331 bits (171), Expect = 2e-95
Identities = 180/183 (98%), Gaps = 1/183 (0%)
Strand = Plus / Minus
Query: 1 attccctttgtttgccgtttggctttgggtcatttcaaggtatactggctgaagtttcat 60
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 attccctttgtttg-tgtttggctttgggtcatttcaaggtatactggctgaagtttcat 283
Query: 61 cttcttcagtcagccttctgcagaggtactaatagttactgttgtcggttcccttcgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cttcttcagtcagccttctgcagaggtactaatagttactgttgtcggttcccttcgggt 223
Query: 121 tttctcctttaagagttaaaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 222 tttctcctttaagagttaaaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtct 163
Query: 181 gtg 183
|||
Sbjct: 162 gtg 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 586
Length adjustment: 8
Effective length of query: 179
Effective length of database: 578
Effective search space: 103462
Effective search space used: 103462
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no497_a22.g1 MSMg01no497_a22.g1 CHROMAT_FILE:
MSMg01no497_a22.g1 PHD_FILE: MSMg01no497_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:36 2005
(422 letters)
>mm_chr7_143749680_143750501
Length = 822
Score = 754 bits (390), Expect = 0.0
Identities = 414/422 (98%)
Strand = Plus / Plus
Query: 1 caattccttctagtgtgcatacatatgccatggatgggactgtggaaatggcagtacaca 60
||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 201 caattccctctagtgtgcatacacatgccatggatgggactgtggaaatggcagtataca 260
Query: 61 tgcaagtgcagtaagacctgaacataagttccaatgtgcaaacagtgtgcaaatgtgtgt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 tgcaagtgcagtaagacctgaacataagttccaatgtgcaaacaatgtgcaaatgtgtgt 320
Query: 121 gtgttgtgggtggaatagctgtggaaatggacataggtgtagtgcctgagaaggtaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgttgtgggtggaatagctgtggaaatggacataggtgtagtgcctgagaaggtaacaa 380
Query: 181 tagatgtgatgggacagggatagaaacatgggtgtgatgagcatgggtggggtagggata 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 tagatgtgatgggacagggatagaaacatgagtgtgatgagcatgggtggggtagggata 440
Query: 241 tgatgcatatatcgatataggtggcatggatgggaatatggtgtggatgtgaatagagac 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatgcagatatcgatataggtggcatggatgggaatatggtgtggatgtgaatagagac 500
Query: 301 aggaatgcaagagtgtactctatgaatgtgaatggaaacaaggctggagtagggatatga 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 aggaatgcaagagtgtactctatgaatgtgaatggagacaaggctggagtagggatatga 560
Query: 361 tatgggtatgaacagggaaagaatggagattgatggaaatatggaggatatagacagagg 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgggtatgaacagggaaagaatagagattgatggaaatatggaggatatagacagagg 620
Query: 421 tg 422
||
Sbjct: 621 tg 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
