Query= MSMg01no498_f23.b1 MSMg01no498_f23.b1 CHROMAT_FILE:
MSMg01no498_f23.b1 PHD_FILE: MSMg01no498_f23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:22 2005
(546 letters)
>mm_chr7_68360644_68361590
Length = 947
Score = 667 bits (345), Expect = 0.0
Identities = 369/377 (97%), Gaps = 1/377 (0%)
Strand = Plus / Minus
Query: 171 atgtcccccgccctactgaagctttaaagttccgtgaggtcccatttattaattttaatc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 atgtcccccgccctactgaagctttaaagttccgtgaggtcccatttattaattttaatc 888
Query: 231 ttagagcctgaaccatttgagttcagtttaggaaatttccccctgggccaatgcgttcaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 ttagagcctgaaccatttgagttcagtttaggaaatttccccctgggccaatgcgttcaa 828
Query: 291 ggctctttgccactttcttttctattacattcagtgtagctagtttgatgttgttatctt 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ggctctttgccactttcttttctattacattcagtgtagctagtttgatgttgttatctt 768
Query: 351 tcattgacttggactgagctatatatcgagttgtcaatcctgtttgatctcagaaggaat 410
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 767 tcattgacttggactgagctatatatcaagttgtcaatcctgattgatctcagaaggaat 708
Query: 411 ctgcactagaagtagaactatttcttcccactttagtttcacacacatttttcaaagtgt 470
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 707 ctgcactagaagtagaactatttcttcccacttcagtttcacacacatttttcaaagtgt 648
Query: 471 cttcagaatctactccttcttttt-agtcataatatcctagtactatatgaatgaaagaa 529
|||||||| || |||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 647 cttcagaagctgctcctttttttttagtcataatatcctagtactatatgaatgaaagaa 588
Query: 530 tcaaagaagagagcatc 546
||||| |||||||||||
Sbjct: 587 tcaaacaagagagcatc 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 947
Length adjustment: 10
Effective length of query: 536
Effective length of database: 937
Effective search space: 502232
Effective search space used: 502232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_f23.g1 MSMg01no498_f23.g1 CHROMAT_FILE:
MSMg01no498_f23.g1 PHD_FILE: MSMg01no498_f23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:22 2005
(545 letters)
>mm_chr7_68149786_68150730
Length = 945
Score = 1006 bits (520), Expect = 0.0
Identities = 537/545 (98%), Gaps = 4/545 (0%)
Strand = Plus / Plus
Query: 1 aattggtttaaaagaaacaaatatctgattgataggtagaaagattgatagatagataga 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 aattggtttaaaagaaacaaatatctgattgataggtagaaagatt----gatagataga 260
Query: 61 tagatagatagatagatagatagatagatagatagatagacagacagatagctaagcaga 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tagatagatagatagatagatagatagatagatagatagatagacagatagctaagcaga 320
Query: 121 taaatgggtggaaacatgatgttttgtttccacaagcatctagcatatttcatgattcta 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaatgggtggaaccatgatgttttgtttccacaagcatctagcatatttcatgattcta 380
Query: 181 gaaatccaatttcctactgatacaggatatagaagaaggaaaagaggaggcatgtataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaatccaatttcctactgatacaggatatagaagaaggaaaagaggaggcatgtataat 440
Query: 241 aactaacttattgcttgagatttgttgtaaaatttgaaacctaaatctctataatattct 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 aactaacttattgcttgagatttgttgtaaaatttgaaacctaagtctctataatattct 500
Query: 301 atagatcaaactctttttttcattccaggtaaaatcagaaaagtgaggtaagatctaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atagatcaaactctttttttcattccaggtaaaatcagaaaagtgaggtaagatctaatt 560
Query: 361 catttacaaagctatgaaaaagaaatgttagaggttagtgtctgcacacaaaccctggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catttacaaagctatgaaaaagaaatgttagaggttagtgtctgcacacaaaccctggca 620
Query: 421 gtattaatgatgctatgttttgcttgtaaacagaagcctagcatggctgtcctgtggagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtattaatgatgctatgttttgcttgtaaacagaagcctagcatggctgtcctgtggagg 680
Query: 481 ctctgccaggagacagatacagatacttgcagcaaaccattggactgangtcaagtaccc 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 ctctgccaggagacagatacagatacttgcagcaaaccattggactgaggtcaagtaccc 740
Query: 541 ctgtg 545
|||||
Sbjct: 741 ctgtg 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
