Query= MSMg01no498_h17.b1 MSMg01no498_h17.b1 CHROMAT_FILE:
MSMg01no498_h17.b1 PHD_FILE: MSMg01no498_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:32 2005
(567 letters)
>mm_chr7_96333319_96334286
Length = 968
Score = 1006 bits (520), Expect = 0.0
Identities = 553/570 (97%), Gaps = 13/570 (2%)
Strand = Plus / Minus
Query: 5 gaattctctctcttt---tcatgaaatttctacatttcaaaacacacagttgaggcatgg 61
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaattctctctc--taaatgatgaaatttctacatttcaaaacacacagttgaggcatgg 507
Query: 62 gtgatgacttaaatacctgtcagtgtgaaagccagggggtctcagtggcgagtgctaggc 121
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtgatgacttaaacacctgtcagtgtgaaagccagggggtctcagtggcgagtgctaggc 447
Query: 122 tgatgggagaccccacctctaaaacacaggggtgacagctcctaaggttgacagtgcctg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgatgggagaccccacctctaaaacacaggggtgacagctcctaaggttgacagtgcctg 387
Query: 182 agggttgacttcttgatgcactagcacacacacaagtacaaacatgcacacatgcacacg 241
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 386 agggttgacttcttgatgcactagcacacacacgagtacaaacatgcacacatgcacacg 327
Query: 242 ataagatactgtactatgtatgagaccatatgacatc----ttttcttaaggttcctaaa 297
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 326 ataagatactgtactatgtatgagaccatatgacatcaaaa----cttaaggttcctaaa 271
Query: 298 taagtctgctttgataagcatacctggaaaactagaagattctagttgtatgtaagcaca 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 taagtctgctttgataagcatacctggaaaactagaagattctagttgtatgtaagcaca 211
Query: 358 ttcctgtaaggcagaaagaacaccatgagttcagggctaatttgagctaacagtgagttg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ttcctgtaaggcagaaagaacaccatgagttcagggctaatttgagctaacagtgagttg 151
Query: 418 aaggcttgcctagagtacagtatgagaccttgtctcaaagacaaattgccgttgctaata 477
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aaggcttgcctggagtacagtatgagaccttgtctcaaagacaaattgccgttgctaata 91
Query: 478 tgttattttaatgccacattaaacatcagcattaggcacaataaacagaaatatggatga 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 tgttattttaatgccacattaaacatcagcattaggcacaataaacagaaatatggatga 31
Query: 538 cataactatttaccaccatcctcttttaag 567
||||||||||||||||||||||||||||||
Sbjct: 30 cataactatttaccaccatcctcttttaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 968
Length adjustment: 10
Effective length of query: 557
Effective length of database: 958
Effective search space: 533606
Effective search space used: 533606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_h17.g1 MSMg01no498_h17.g1 CHROMAT_FILE:
MSMg01no498_h17.g1 PHD_FILE: MSMg01no498_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:32 2005
(625 letters)
>mm_chr7_96199760_96200784
Length = 1025
Score = 1193 bits (617), Expect = 0.0
Identities = 623/625 (99%)
Strand = Plus / Plus
Query: 1 aattagccatggagcacctcgtgtgggttaatggatgagagaaatggaaacagacatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattagccatggagcacctcgtgtgggttaatggatgagagaaatggaaacagacatgac 260
Query: 61 ttctgcacagaaatggccctgggtggtgggggaaggcctcagtgccaagccaggcagcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgcacagaaatggccctgggtggtgggggaaggcctcagtgccaagccaggcagcac 320
Query: 121 atctccttctctgggggataggatattcctccagtgtgcctgctgaaaaactaacttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctccttctctgggggataggatattcctccagtgtgcctgctgaaaaactaacttccc 380
Query: 181 tccctcccagctcggaaaggcagaactagattctattgcagggctcctgacaccactgta 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccctcccatctcggaaaggcagaactagattctattgcagggctcctgacaccactgta 440
Query: 241 agtcttcagtccaagagaatatgtaggcttcagggccctggtctgcataagcacatggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcttcagtccaagagaatatgtaggcttcagggccctggtctgcataagcacatggtt 500
Query: 301 tgctcgggatagatgcataggactgtgctcaaccaagctatttttctttacagtatgttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctcgggatagatgcataggactgtgctcaaccaagctatttttctttacagtatgttt 560
Query: 361 tctcaagagcactcataaactgacttcgtgtaaccaggactgtcccccaccatgaacact 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 tctcaagagcactcataaactgacttcgtgtaaccagaactgtcccccaccatgaacact 620
Query: 421 taataggtgttcactgcttcttcaaaaaaggtaacccccttttgagtctgaactcctagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taataggtgttcactgcttcttcaaaaaaggtaacccccttttgagtctgaactcctagg 680
Query: 481 tcaacaaagaacttgatgtctcctgttcttcttccagacactcactttgtgagacaggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcaacaaagaacttgatgtctcctgttcttcttccagacactcactttgtgagacaggat 740
Query: 541 tcctaactgctcgtactatcaaatctgtacctgtctcactctttatctaaaatgacttgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcctaactgctcgtactatcaaatctgtacctgtctcactctttatctaaaatgacttgt 800
Query: 601 gtctctttctgctgaagcatctaat 625
|||||||||||||||||||||||||
Sbjct: 801 gtctctttctgctgaagcatctaat 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
