Query= MSMg01no499_h02.b1 MSMg01no499_h02.b1 CHROMAT_FILE:
MSMg01no499_h02.b1 PHD_FILE: MSMg01no499_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:49 2005
(454 letters)
>mm_chr7_37106350_37107201
Length = 852
Score = 752 bits (389), Expect = 0.0
Identities = 441/469 (94%), Gaps = 21/469 (4%)
Strand = Plus / Minus
Query: 1 aaggaagctgtcttctcaataaaactgcagtcattatagcctgccaccctgaccacatac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 622 aaggaagctgtcttctcaataaaactgcagtcattatagcctgccaccctgaccacgtac 563
Query: 61 cgtgagcctccctggtaagcatggagggctgaggctcgaggactgattaccatcatccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cgtgagcctccctggtaagcatggagggctgaggctcgaggactgattaccatcatccag 503
Query: 121 agaggacaggcacaggcagagttgccttgcgccctgatgtctgtgcccttcttaagcaag 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 502 agaggacaggcacaggcagagttgccttgctccctgatgtctgtgcccttcttaagcaag 443
Query: 181 agaggtggatggatgtggatctaagcctcaccccacccccacacctaccgccacacactc 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 442 agaggtggatggatgtggatctaagcctcaccccacccccacgcctaccgccacacactc 383
Query: 241 acatatgccctttt---gttctcatgcacacacgcacacacaaaag-tctgcctctgata 296
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 382 acatatgccc----agggttctcatgcacacacgcacacacaaaaggtctgcctctgata 327
Query: 297 taaaataaacatacaaacaaaagctaagttctgctgccctcgactttactagttatacaa 356
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 326 taaaataaacatacaaacaaaagctaagttgtgctgccctcgacttcactagttatacaa 267
Query: 357 ctagaatcctgtaagaaaatcagaaccctgggacactgtgttctgtctttaaaaaaaaaa 416
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 266 ctagaatcctgtaagaaaatcagaaccctgggacactgt--tctgtcttaaaaaaaaaaa 209
Query: 417 acaaaaaa-----------ctgctctataagttgaggggttttgttctt 454
| |||||| ||||||||||||||||||||||||||||||
Sbjct: 208 aaaaaaaaaaaaaaaaaaactgctctataagttgaggggttttgttctt 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 852
Length adjustment: 10
Effective length of query: 444
Effective length of database: 842
Effective search space: 373848
Effective search space used: 373848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_h02.g1 MSMg01no499_h02.g1 CHROMAT_FILE:
MSMg01no499_h02.g1 PHD_FILE: MSMg01no499_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:49 2005
(638 letters)
>mm_chr7_36889906_36890943
Length = 1038
Score = 1218 bits (630), Expect = 0.0
Identities = 636/638 (99%)
Strand = Plus / Plus
Query: 1 tctcgcctgcatctgcttatatatggattttggaaatagctgagggtgtgtgtgacacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcgcctgcatctgcttatatatggattttggaaatagctgagggtgtgtgtgacacag 260
Query: 61 gtgtgctcgtcattacgggtgctgcagctctgcctctcctggtggctgtttagcttcgtt 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtgctcatcattacgggtgctgcagctctgcctctcctggtggctgtttagcttcgtt 320
Query: 121 cgccctcacggatggaaggagctcgagaaggtactttagagacacccaccccacacattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgccctcacggatggaaggagctcgagaaggtactttagagacacccaccccacacattc 380
Query: 181 ttgtgttcgcacctcttaaatgattatagtctctgctttatgttagcactgcttatgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtgttcgcacctcttaaatgattatagtctctgctttatgttagcactgcttatgctg 440
Query: 241 tggcatgtttttatgaggctgtatagaatacagcttttaatatcaatgtgtgtctcacac 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggcatgcttttatgaggctgtatagaatacagcttttaatatcaatgtgtgtctcacac 500
Query: 301 atgtgttctgagaacacattacattagaaggtgctagaaaggaaaaagacgctagcgatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtgttctgagaacacattacattagaaggtgctagaaaggaaaaagacgctagcgatc 560
Query: 361 ttaaacgcctccaagtgcctttataagatgcaatcaaccatgtcttaattccctctatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaacgcctccaagtgcctttataagatgcaatcaaccatgtcttaattccctctatcc 620
Query: 421 atcattagttgagtgtcgaaaatatatgcaaaagaaaatggaagacaggcactaaggtag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atcattagttgagtgtcgaaaatatatgcaaaagaaaatggaagacaggcactaaggtag 680
Query: 481 tgaagaggttttgcaaattagattatctgagtgtatgattccacggatagaaggatattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgaagaggttttgcaaattagattatctgagtgtatgattccacggatagaaggatattg 740
Query: 541 tccaaagggccctttaattattattcacttcctttggtgcacaagagaatgctgtcaggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tccaaagggccctttaattattattcacttcctttggtgcacaagagaatgctgtcaggg 800
Query: 601 ccgcaagcacacttcactgcagatgaattaaaaggatg 638
||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccgcaagcacacttcactgcagatgaattaaaaggatg 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
