Query= MSMg01no499_l10.b1 MSMg01no499_l10.b1 CHROMAT_FILE:
MSMg01no499_l10.b1 PHD_FILE: MSMg01no499_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:10 2005
(352 letters)
>mm_chr7_17340902_17341656
Length = 755
Score = 656 bits (339), Expect = 0.0
Identities = 350/355 (98%), Gaps = 3/355 (0%)
Strand = Plus / Plus
Query: 1 aggaaccaccgtcctctctggcccttagcctgtagtctctaaggggattcctgactcgaa 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 aggaaccaccgtcctctctggcccttagcctggagtctctaaggggattcctgactcgaa 260
Query: 61 ttccacatcccatcctgcaggaaatcctgttgattccg---tggaaacacaggccagccc 117
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ttccacatcccatcctgcaggaaatcctgttgattccgccgtggaaacacaggccagccc 320
Query: 118 tgacagctactccagcaccatcatctcctgcgcgactaaaacaatcacctccgtagagct 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacagctactccagcaccatcatctcctgcgcgactaaaacaatcacctccgtagagct 380
Query: 178 tccgagccagctgccaacagctgccagcacaccaccaggtctggcagacttgagagaagg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccgagccagctgccaacagctgccagcacaccaccaggtctggcagacttgagagaagg 440
Query: 238 aagccagataagggtgcccagtgccgccctgggattagaattacagacactgtgagccac 297
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagccagaaaagggtgcccagtgccgccctgggattagaattacagacactgtgagccac 500
Query: 298 ttgaatgctgggaaccgaactcgggtcttttgtgagagcaatgctgctcttaact 352
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgaatgctgggaaccgaactcgggtcttttgtgagagcaatgctgctcttaact 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 755
Length adjustment: 9
Effective length of query: 343
Effective length of database: 746
Effective search space: 255878
Effective search space used: 255878
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no499_l10.g1 MSMg01no499_l10.g1 CHROMAT_FILE:
MSMg01no499_l10.g1 PHD_FILE: MSMg01no499_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:10 2005
(244 letters)
>mm_chr7_17543956_17544599
Length = 644
Score = 426 bits (220), Expect = e-124
Identities = 238/244 (97%)
Strand = Plus / Minus
Query: 1 aaagcaaatgtgtatcgtctgtacagctagagttccatggtcctcacatccctttgtctg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 444 aaagcaaatgtgtatcgtctgtacagctagagttccatggtcctcacgtccctttgtctg 385
Query: 61 tattctctaacatggaaaaggtggattgggagtgatggggaggagagatgcctcacaggg 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 384 tattctctaacatggaaaaggtggattgggagcgatggggaggagagatgcctcacaggg 325
Query: 121 accccgtggcttggaggatgtatctatgggcaaggtcaagtgcagccaggaggaaggttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 accccgtggcttggaggatgtatctatgggcaaggtcaagtgcagccaggaggaagggca 265
Query: 181 gtgcagggagtcatctccctagataagtgggatcttgcagttctgtgtgctcttcaaggc 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtgcaggaagtcatctccctagataagtgggatcttgcagttctgtgtgctcttcaaggc 205
Query: 241 catc 244
||||
Sbjct: 204 catc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
