Query= MSMg01no500_k08.b1 MSMg01no500_k08.b1 CHROMAT_FILE:
MSMg01no500_k08.b1 PHD_FILE: MSMg01no500_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:18 2005
(597 letters)
>mm_chr7_143369694_143370688
Length = 995
Score = 971 bits (502), Expect = 0.0
Identities = 572/600 (95%), Gaps = 10/600 (1%)
Strand = Plus / Minus
Query: 1 ctcgggcctaagagttccaggggcagaaagaacagaagtggggagcacattgggggattc 60
||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||| ||
Sbjct: 794 ctcgggcctaagagttccaggggcagaaagaacagcagtggggagcacgttgcgggactc 735
Query: 61 caggaaaggctggggcttctgccatggggaaaggagagatgatgagcaactggaagtaac 120
||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||
Sbjct: 734 caggaaaggctggggcttctgccatggtgaaaggggagatgatgagcaactggaaggaac 675
Query: 121 tgtcccaacaaagcctttcccattctgagcctgaaccctgaggtgggactttcttccaat 180
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 674 tgtcccaacaaagcctttcccattccgagcctgaatcctgaggtgggactttcttccaat 615
Query: 181 cctttgccaagttgtccttgtataaggacaggacatgatggagaccaagggcatctcaca 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cctgtgccaagttgtccttgtataaggacaggacatgatggagaccaagggcatctcaca 555
Query: 241 gctcttttt----cttcctgttttatcaaaactatagttgttcaatggactgtggcaggg 296
|| | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gcac----tggcacttcctgttttatcaaaactatagttgttcaatggactgtggcaggg 499
Query: 297 cctcaggttgtctctatgggggacagccttcatttaaactgcatggcaccttttcatctt 356
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 498 tctcaggttatctctatgggggacagcctccatttaaactgcatggcaccttttcatctt 439
Query: 357 ctctccttattccttgttgtaccacatatggtttggctagttttaacattgctctccaga 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctctccttattccttgttgtaccacatatggtttggctagttttaacattgctctccaga 379
Query: 417 tgtgccttgcagcatgctattgcccaatcacttctatcattttcttttctgtatcctcat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgtgccttgcagcatgctattgcccaatcacttctatcattttcttttctgtatcctcat 319
Query: 477 tgtcttcactcttttgtatgtttgatggtagtctttcataggcatgtgaacttgcacaga 536
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 318 tgtcttcactcttttgtatgtttgatggtagtctttcagaagcatgtgaacttgcacaga 259
Query: 537 tatgtgaagaacgctatagctttcagacacactcctaattgtgacctttttctgatttaa 596
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gatatgaagaacgcta--gctttcagacacactcctaattgtgacctttttctgatttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 995
Length adjustment: 10
Effective length of query: 587
Effective length of database: 985
Effective search space: 578195
Effective search space used: 578195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no500_k08.g1 MSMg01no500_k08.g1 CHROMAT_FILE:
MSMg01no500_k08.g1 PHD_FILE: MSMg01no500_k08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:19 2005
(248 letters)
>mm_chr7_143189661_143190308
Length = 648
Score = 456 bits (236), Expect = e-133
Identities = 245/248 (98%)
Strand = Plus / Plus
Query: 1 tgtactgtgttggtgttacttgcagagatgtgaaccttctcacatgggtaattctctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 tgtactgtgttggtgttacttgcagagatgtgaaccttctcacatgggtaattctatctt 260
Query: 61 gttctaaccccgagccacactgtaccctcttggagattggaacaactatgccttacatga 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gttctaaccccgagccacactgtaccctcttggagattggaacaaatatgccttacatga 320
Query: 121 tcccaatctgggtccttggctggtccattctctgacataagaatagtgggcagcctctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccaatctgggtccttggctggtccattctctgacataagaatagtgggcagcctctgc 380
Query: 181 tgcttggcagatgttgaattcattaactctccagagaagcttccagaataagctggccaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 tgcttggcagatgttgaattcattaactctccagagaagcttccagaataagctgggcaa 440
Query: 241 gtacgtaa 248
||||||||
Sbjct: 441 gtacgtaa 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
