Query= MSMg01no500_l22.b1 MSMg01no500_l22.b1 CHROMAT_FILE:
MSMg01no500_l22.b1 PHD_FILE: MSMg01no500_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:26 2005
(619 letters)
>mm_chr7_77416403_77417420
Length = 1018
Score = 1129 bits (584), Expect = 0.0
Identities = 608/616 (98%), Gaps = 2/616 (0%)
Strand = Plus / Plus
Query: 5 ggaattcactctgtattcccggcctctttctcagagatctgcctgttgggataaagacat 64
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactctgtagaccaggcctctttctcagagatctgcctgttgggataaagacat 263
Query: 65 gtatcaccattgcctgactgagaccgtgtgtggtggtggggggcggggagcaggggtaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtatcaccattgcctgactgagaccgtgtgtggtggtggggggcggggagcaggggtaca 323
Query: 125 tgatggcacataattgtctgcatatggagtgaaattaatgtatatcatggatagattttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgatggcacataattgtctgcatatggagtgaaattaatgtatatcatggatagattttt 383
Query: 185 ttt-ggtagttcctcctcttgctgcattcttgcctcaattttccacttcaaaataataat 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttttggtagttcctcctcttgctgcattcttgcctcaattttccacttcaaaataataat 443
Query: 244 gaagttgtaagttagaaagtaattggatgggatggtgagatggctcggtgggtaagagca 303
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 444 gaagttgtaagttagaaagtaattggatgggatggtgagatggctcagtgggtaagagca 503
Query: 304 cccgactgctcttctgaaggtccggagttcaaatcccagcaatcacatggtggctcacaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cccgactgctcttctgaaggtccggagttcaaatcccagcaatcacatggtggctcacaa 563
Query: 364 ccgtctgtaacaagatctgactccctcttctggagtgtctgaagacagctacaatgtact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccgtctgtaacaagatctgactccctcttctggagtgtctgaagacagctacaatgtact 623
Query: 424 tacatataatacataaataaatcttttaaaaaaaagaaatactattaaaaaaaacgaaag 483
||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 624 tacatataatacataaataaatcttttttaaaaaagaaatactattaaaaaaa-cgaaag 682
Query: 484 taattgggttagcatgatggtacttggagagataaagataaaaaggattgtgagtctgag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 taattgggttagcatgatggtacttggagagataaagataaaaaggattgtgagtctgag 742
Query: 544 gccagcctggtctgagcttcacaaaaaccatatcttaacaacaacaaagagtcaggggtg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gccagcctggtctgagcttcacaaaaaccatatcttaacaacaacaaagagtcaggggtg 802
Query: 604 aggagaggtatccgaa 619
||||||||||||||||
Sbjct: 803 aggagaggtatccgaa 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space: 613872
Effective search space used: 613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no500_l22.g1 MSMg01no500_l22.g1 CHROMAT_FILE:
MSMg01no500_l22.g1 PHD_FILE: MSMg01no500_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:26 2005
(553 letters)
>mm_chr7_77580808_77581760
Length = 953
Score = 982 bits (508), Expect = 0.0
Identities = 520/524 (99%)
Strand = Plus / Minus
Query: 1 ttcttctgttcagctcgcagtttgcaaccaagaacactaggagagtgtaaggcttggatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttcttctgttcagctcgcagtttgcaaccaagaacactaggagagtgtaaggcttggatt 465
Query: 61 ccacaatccattcaacaatagtagattaaaagaaacctcaaaaagattaaataactcaca 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 ccacaatccattcaataatagtagattaaaagaaacctcaaaaagattaaataactcaca 405
Query: 121 aactcatcgtctaagtacatagaagcagtgctcaaatagaagtatgcttcttagctttcc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aactcattgtctaagtacatagaagcagtgctcaaatagaagtatgcttcttagctttcc 345
Query: 181 ttaagaccatattggatccaaaaagatccaaaaagagatctaaaaagtctctttcccttt 240
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 344 ttaagaccatattggatccaaaatgatccaaaaagagatctaaaaagtctctctcccttt 285
Query: 241 aagttaattagaagctgggaagcaggaactgaaaaagaatgaagttgacagagagaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aagttaattagaagctgggaagcaggaactgaaaaagaatgaagttgacagagagaagga 225
Query: 301 aggggagccatgatgagtgaatgatatatacacatgtggaaatatcacggtgaaacacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 aggggagccatgatgagtgaatgatatatacacatgtggaaatatcacggtgaaacacgt 165
Query: 361 taatctgtacagttaatatgtgttaatagatgtaataatttaaagaaaaatgtttctcga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 taatctgtacagttaatatgtgttaatagatgtaataatttaaagaaaaatgtttctcga 105
Query: 421 catgatcataagcttcatggcatgttaacatccatataatgtttcaatactacctggcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 catgatcataagcttcatggcatgttaacatccatataatgtttcaatactacctggcta 45
Query: 481 aatgtgcgcaatcaatctactactcttggacatatagttggctt 524
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 aatgtgcgcaatcaatctactactcttggacatatagttggctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
