XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCCTGT
CTTCCCTTCCAAATTATTTTCCCCAAACACTACTATAATTTGTAATTCAT
GTTATTCCAGTTAACTAATTTCTCATCATACTCAAGATAGACTTCCTAAT
AATGTGAACCTAATTATCTTCTATGCTTCCAAAGCTCTACATTCAAAACT
ATGTTTACAGCTCCCCCAAACTGTCATTAACTCACCTTTGAATATATTGT
CCCTTTTATAAACTCTCCTCTTTACCCATATCCTAGCTTCCCAACACCAA
GTTAACTCTTAGAGATTTTACAAGAGTCAATTCAAGTGTCAACTTCTTTT
AGAAATGTTTCCTGGGCCTGGCGAGATGGTTCAGTGGGTAAGAGCACTGA
CTGCTCTTCCAAAGGTACAGAGTTCAAATCCCAGCAACCACATGGTGGCT
CACAACCACCCATGATGAGATCTTACATCCTCTTCTGGCACGTCTGAAGA
CAGCTACAGTGTACTTATGTATAATAATAAATAAATCTAAGAAAGAAAGG
AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA
GGAAGGAAGGAAGGAAAGACAGATTTCCTATCACCTTGTGGCCTGAAGTC
AAGTTGTAACTTTCTTATGCTGCATAATACTTTTCCTCAAATCGACAGGC
AGGAAAAATTCTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCATTGAACATTCACACATACGTGCACACGTGCACATGTTTCTT
TATCCAGTCATCTGCGGATGGACACTCAAGTCATGGTGACGCGGTGGGGA
GTGCCTTTGTGAGTTGATGACTTCACTCCTTTCCTGTGGGAAATCTCTGC
TNATTAAATACAGTCAAAAGACAACCCCAGGAACAAAAGAAAACCAGGGA
AAGAAAATGTTTTTCTTTGGAAAAGTTTACGGAAAGGTGGGGAAAACTTT
TGTAAGGGCAAAACCCCCCATTTTTTTTTTGGGGCCCCCAAAAAAAAGGG
TTCTCCAAAAAAAAAAAAACAATTTTTTTAAAAAAAAATTTTTCTTTTTT
TAAAAAGGAGAACCTTTTTAGAGGAAAACACCCTAAAATTTTTCTTGGTT
TTCCCCTTTTAAAAACCCCTCTTTTAAAATCTTTGGGGGAAAAATTTTTA
AATTCTTTTTTTTTTTTTTCCCTACNAAATTTTTTTTTTTTTTGTAAAAA
AAACCCCGGGGTGCCCCTTTAAAATTTTTTTTCCAAATATATTTTTTTTT
TTTGTGGGGGGGAAAAAATAGTTATTATA

Query= MSMg01no501_e01.b1 MSMg01no501_e01.b1 CHROMAT_FILE:
MSMg01no501_e01.b1 PHD_FILE: MSMg01no501_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:03 2005
         (582 letters)



>mm_chr7_117722781_117723761
          Length = 981

 Score = 1064 bits (550), Expect = 0.0
 Identities = 571/578 (98%), Gaps = 1/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccctgtcttcccttccaaattattttccccaaacactactataatttgtaattc 63
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctgtcaacccttccaaattattttccccaaacactactataatttgtaattc 263

                                                                       
Query: 64  atgttattccagttaactaatttctcatcatactcaagatagacttcctaataatgtgaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgttattccagttaactaatttctcatcatactcaagatagacttcctaataatgtgaa 323

                                                                       
Query: 124 cctaattatcttctatgcttccaaagctctacattcaaaactatgtttacagctccccca 183
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 324 cctaattatcttctatgcttccaaagttctacattcaaaactatgtttacagctccccc- 382

                                                                       
Query: 184 aactgtcattaactcacctttgaatatattgtcccttttataaactctcctctttaccca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aactgtcattaactcacctttgaatatattgtcccttttataaactctcctctttaccca 442

                                                                       
Query: 244 tatcctagcttcccaacaccaagttaactcttagagattttacaagagtcaattcaagtg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tatcctagcttcccaacaccaagttaactcttagagattttacaagagtcaattcaagtg 502

                                                                       
Query: 304 tcaacttcttttagaaatgtttcctgggcctggcgagatggttcagtgggtaagagcact 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcaacttcttttagaaatgtttcctgggcctggcgagatggttcagtgggtaagagcact 562

                                                                       
Query: 364 gactgctcttccaaaggtacagagttcaaatcccagcaaccacatggtggctcacaacca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gactgctcttccaaaggtacagagttcaaatcccagcaaccacatggtggctcacaacca 622

                                                                       
Query: 424 cccatgatgagatcttacatcctcttctggcacgtctgaagacagctacagtgtacttat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 623 cccatgatgagatcttacatcctcttctggcacgtctgaagacagctacagtgtacttac 682

                                                                       
Query: 484 gtataataataaataaatctaagaaagaaaggaaggaaggaaggaaggaaggaaggaagg 543
           ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 683 gtataataataaataaatctaagaaaggaaggaaggaaggaaggaaagaaggaaggaagg 742

                                                 
Query: 544 aaggaaggaaggaaggaaggaaggaaggaaggaaggaa 581
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aaggaaggaaggaaggaaggaaggaaggaaggaaggaa 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 91
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 981
Length adjustment: 10
Effective length of query: 572
Effective length of database: 971
Effective search space:   555412
Effective search space used:   555412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)