Query= MSMg01no502_m04.b1 MSMg01no502_m04.b1 CHROMAT_FILE:
MSMg01no502_m04.b1 PHD_FILE: MSMg01no502_m04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:52 2005
(652 letters)
>mm_chr7_106770917_106771967
Length = 1051
Score = 1131 bits (585), Expect = 0.0
Identities = 635/657 (96%), Gaps = 11/657 (1%)
Strand = Plus / Minus
Query: 1 tgctggctgtgggatcactaccagcaaacaagtggaccttttacgtactgctacttttga 60
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 661 tgctggctgtggggtcactaccagcaaacaagtggaccttttatgtactgctacttttga 602
Query: 61 ttctctgcaaagtcctaagaacttagttttactgagccacaaaatatcaacagatatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttctctgcaaagtcctaagaacttagttttactgagccacaaaatatcaacaga------ 548
Query: 121 ttttt----aaaaatcaattgaaggcctacagtatatgaagtggggttttgccttcgtga 176
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 547 tttttaaaaaaaaatcaattgaaggcctacagtatatgaagtggggttttgcctttgtga 488
Query: 177 cttttatggaccgcattagaacctagctctggtctgctatgcaatcttccagtccatatc 236
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cttttatggacagcattagaacctagctctggtctgctatgcaatcttccagtccatatc 428
Query: 237 cgcagtcttttttttctgcaaatctagccgttcatttagcctatacttaatacagctctg 296
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cgcagtcttcctcctctgcaaatctagccgttcatttagcctatacttaatacagctctg 368
Query: 297 ccagtcccaaggaggctaatgacccagagcggagacatttgatcaaggtctagg-gaaaa 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 367 ccagtcccaaggaggctaatgacccagagcggagacatttgatcaaggtctaggaaaaaa 308
Query: 356 gagatcacaggaaactttgagagccagagaaagagcccctgacctagcctaaaaggattg 415
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gagatcgcaggaaactttgagagccagagaaagagcccctgacctagcctaaaaggattg 248
Query: 416 catagatgaagtagcatttgagctgagttggggtttattctatttggtttctgcaatcct 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 catagatgaagtagcatttgagctgagttggggtttattctatttggtttctgcaatcct 188
Query: 476 ggagggtcaaatccagatacttacaattactgtaccactgagctacatcctcaagccctt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ggagggtcaaatccagatacttacaattactgtaccactgagctacatcctcaagccctt 128
Query: 536 ggtttgtgttttgtttggttggttttcattcagggtcttgctatgtagcccaaactgccc 595
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 127 ggtttgtgttttgtttggttggttttcatacagggtcttgctatgtagcccaaactgccc 68
Query: 596 ttgaatttaagaccctacagtcttatcctccctagtactgtaactccaggaatgggc 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 ttgaatttaagaccctacagtcttatcctccctagtactgtaactccaggaatgggc 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1051
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1041
Effective search space: 668322
Effective search space used: 668322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_m04.g1 MSMg01no502_m04.g1 CHROMAT_FILE:
MSMg01no502_m04.g1 PHD_FILE: MSMg01no502_m04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:53 2005
(325 letters)
>mm_chr7_106737240_106737965
Length = 726
Score = 623 bits (322), Expect = 0.0
Identities = 325/326 (99%), Gaps = 1/326 (0%)
Strand = Plus / Plus
Query: 1 gcctgggcctgaggacacaggaaaggtaggtcactccaagaaggccatctcgggtccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctgggcctgaggacacaggaaaggtaggtcactccaagaaggccatctcgggtccaga 260
Query: 61 ctctcatgtccccagaatcctggtttt-ccccccatggggtggtggacagttcaaactcc 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 ctctcatgtccccagaatcctggttttcccccccatggggtggtggacagttcaaactcc 320
Query: 120 ctttcctgtggaagctgcctggctgatgttccttggataagcaatcattcacaggctccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttcctgtggaagctgcctggctgatgttccttggataagcaatcattcacaggctccc 380
Query: 180 tcaagtcactttttctggctctggtgttgactgcacaagaccagcaaattctgagcacct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaagtcactttttctggctctggtgttgactgcacaagaccagcaaattctgagcacct 440
Query: 240 acacatggcctcacacaggccctggtaactttgaattttacagagggcatagctgaagct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacatggcctcacacaggccctggtaactttgaattttacagagggcatagctgaagct 500
Query: 300 tagaaaggggtggaaggagcaggtcc 325
||||||||||||||||||||||||||
Sbjct: 501 tagaaaggggtggaaggagcaggtcc 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 726
Length adjustment: 9
Effective length of query: 316
Effective length of database: 717
Effective search space: 226572
Effective search space used: 226572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
