Query= MSMg01no503_o07.b1 MSMg01no503_o07.b1 CHROMAT_FILE:
MSMg01no503_o07.b1 PHD_FILE: MSMg01no503_o07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:18 2005
(474 letters)
>mm_chr7_117203057_117203930
Length = 874
Score = 750 bits (388), Expect = 0.0
Identities = 429/448 (95%), Gaps = 11/448 (2%)
Strand = Plus / Plus
Query: 37 gccgccacaagccagttatccctgtggtaacttttctgacacctcctgctacattgttcc 96
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 237 gccgccacaagccagttatccctgtggtaacttttctgacatctcctgctacattgttcc 296
Query: 97 aacatgccagaggctgttcaccttggagacccatattctaatttttaagggtccaagtgt 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aacatgccagaggctgttcaccttggagacccatattctaatttttaagggtccaagtgt 356
Query: 157 tttgtgtccttggggattaaacccatgaacaagatggtggtggcatttgcactaggaatg 216
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttgtgtccttgaggattaaacccatgaacaagatggtggtggcatttgcactaggaatg 416
Query: 217 tttaaccattgttcttttctatattcatactggccgggcagtgct-------gcctttaa 269
|||||||||||||| | | ||||||||||||||||||||||||| ||||||||
Sbjct: 417 tttaaccattgttcataacaatattcatactggccgggcagtgcttgcgcacgcctttaa 476
Query: 270 tcccagcactcaggaggcagaggtaggcggatttcttagttcaaggtcagcctggtctac 329
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 477 tcccagcactcaggaggcagaggtaggcggatttctgagttcaaggccagcctggtctac 536
Query: 330 agagtgagttccaggacagccagggctacagagaaaccccatctggaaaaaaaaagcaaa 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 537 agagtgagttccaggacagccagggctacagagaaaccccatctggaaaaaaaa-gcaaa 595
Query: 390 aaataata---ctgttcagaaccagagatggtggcacatgcctatctataatcccattac 446
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aaataataatactgttcagaaccagagatggtggcacatgcctatctataatcccattac 655
Query: 447 tggccatgtggaggtagaaaggtccaag 474
||||||||||||||||||||||||||||
Sbjct: 656 tggccatgtggaggtagaaaggtccaag 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_o07.g1 MSMg01no503_o07.g1 CHROMAT_FILE:
MSMg01no503_o07.g1 PHD_FILE: MSMg01no503_o07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:19 2005
(229 letters)
>mm_chr7_117249148_117249776
Length = 629
Score = 420 bits (217), Expect = e-122
Identities = 226/229 (98%)
Strand = Plus / Minus
Query: 1 cctcttgaagagcagtcagtgctcttacccactgagccatctctccagtcccgcaaaaag 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cctctagaagagcagtcagtgctcttacccactgagccatctctccagtcccgcaaaaag 347
Query: 61 ctcctaattgataacctagttaacgggggcaatgtataaggctgaagagaaggctcaact 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctcctaattgataacctagttaatgggggcaatgtataaggctgaagagaaggctcaact 287
Query: 121 gttaaagactgtgtattccttctactggggacctggctcacaggcatctacagagccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gttaaagactgtgtattccttctactggggacctggctcacaggcatctacagagccagg 227
Query: 181 tctaaggtatctaacaccctcttctggcctccaggagcacccatacacc 229
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tctaaggcatctaacaccctcttctggcctccaggagcacccatacacc 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
