Query= MSMg01no504_j09.b1 MSMg01no504_j09.b1 CHROMAT_FILE:
MSMg01no504_j09.b1 PHD_FILE: MSMg01no504_j09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:14 2005
(632 letters)
>mm_chr7_151935294_151936325
Length = 1032
Score = 1195 bits (618), Expect = 0.0
Identities = 626/630 (99%), Gaps = 4/630 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccactt--accccacacacgcagggcagtgacacagctcacccatgtcccaca 62
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacca--tagaccccacacacgcagggcagtgacacagctcacccatgtcccaca 262
Query: 63 ctgcccttgtccttctcaagagccttgcctggcattttacagcttggttcttgtctccct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctgcccttgtccttctcaagagccttgcctggcattttacagcttggttcttgtctccct 322
Query: 123 tcccttcttggtgtcacgcagttggcgtcatcagaggaccttgtcatggcagagtgtggt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcccttcttggtgtcacgcagttggcgtcatcagaggaccttgtcatggcagagtgtggt 382
Query: 183 gtccactctgccaaagaggagacaagacctgcgcactcccagcatctgtagatgccctgc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtccactctgccaaagaggagacaagacctgcgcactcccagcatctgtagatgccctgc 442
Query: 243 ctcagatcagatccttcccaggctggagttcactccctctgccttgaaagagaatcgtgg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctcagatcagatccttcccaggctggagttcactccctctgccttgaaagagaatcgtgg 502
Query: 303 acccttcatgtgtcccctacacccctcactgttgcttggtaacctcgaatcctgaagagg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acccttcatgtgtcccctacacccctcactgttgcttggtaacctcgaatcctgaagagg 562
Query: 363 agactgtttccattcaacccacactcaccagggaaagaggataaccttatttgttcgaga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agactgtttccattcaacccacactcaccagggaaagaggataaccttatttgttcgaga 622
Query: 423 atgtgactgacaggtgtctgactctagagtaccagggcaatcgcttcttggccttttggc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atgtgactgacaggtgtctgactctagagtaccagggcaatcgcttcttggccttttggc 682
Query: 483 taagatcaagtgtagagtaccagggaaatgggaagaagactaaaggatgtgacttcccac 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 taagatcaagtgtagagtaccagggaaatgggaagaagactaaaggatgtgacttcccac 742
Query: 543 cacatggctagtgatctactcactgtgtggccagagatcttacaagagaggatcctaagt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cacatggctagtgatctactcactgtgtggccagagatcttacaagagaggatcctaagt 802
Query: 603 cacaggcctgtgttgccaacaggtgtctga 632
||||||||||||||||||||||||||||||
Sbjct: 803 cacaggcctgtgttgccaacaggtgtctga 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_j09.g1 MSMg01no504_j09.g1 CHROMAT_FILE:
MSMg01no504_j09.g1 PHD_FILE: MSMg01no504_j09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:14 2005
(588 letters)
>mm_chr7_152105477_152106464
Length = 988
Score = 1129 bits (584), Expect = 0.0
Identities = 587/588 (99%)
Strand = Plus / Minus
Query: 1 actttgtagactaggctgacctcaaactgagagatctgcctactatctcttgagcactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 actttgtagactaggctgacctcaaactgagagatctgcctactatctcttgagcactgg 820
Query: 61 gattaaaggcgtgcaccaccagcacccagctccattgccactccttaatgtatagagctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gattaaaggcgtgcaccaccagcacccagctccattgccactccttaatgtatagagctc 760
Query: 121 accccacacctgttaggagcagcatgaaggccctgcttcagcttcctcccttgtctcgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 accccacacctgttaggagcagcatgaaggccctgcttcagcttcctcccttgtctcgtc 700
Query: 181 acccttgttttctcagctgggcatccagaggcaaaccaagtccagtggagcctgagtcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 acccttgttttctcagctgggcatccagaggcaaaccaagtccagtggagcctgagtcct 640
Query: 241 gtgcatatagcaggaatcaggtcctccagtggtgttggcaatgacagcgcatgttggagg 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gtgcagatagcaggaatcaggtcctccagtggtgttggcaatgacagcgcatgttggagg 580
Query: 301 cagaggcactatgtggtacttcagggcatggacctggggtgggggccagctctgccacca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cagaggcactatgtggtacttcagggcatggacctggggtgggggccagctctgccacca 520
Query: 361 ggcccttagactagatgggtctattttatcacttctaagccataaggtatcctccacctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggcccttagactagatgggtctattttatcacttctaagccataaggtatcctccacctc 460
Query: 421 tggggctgccagagggatggagtgaaacaaggaggcccaagcatggccagcagaggctca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tggggctgccagagggatggagtgaaacaaggaggcccaagcatggccagcagaggctca 400
Query: 481 gcaggcagcaaagatcttatcacggcttcccatgacccatttcacatcggcctgcctctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gcaggcagcaaagatcttatcacggcttcccatgacccatttcacatcggcctgcctctg 340
Query: 541 tgagtcccaccctcagggtaaccctacccagggccactcactctggcc 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tgagtcccaccctcagggtaaccctacccagggccactcactctggcc 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
