Query= MSMg01no505_o08.b1 MSMg01no505_o08.b1 CHROMAT_FILE:
MSMg01no505_o08.b1 PHD_FILE: MSMg01no505_o08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:54 2005
(631 letters)
>mm_chr7_56203947_56204977
Length = 1031
Score = 1160 bits (600), Expect = 0.0
Identities = 624/632 (98%), Gaps = 1/632 (0%)
Strand = Plus / Plus
Query: 1 atactgaaagtgcactcataggctacctaccagcgccaacttgtcactgtcctcacagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atactgaaagtgcactcataggctacctaccagcgccaacttgtcactgtcctcacagac 260
Query: 61 tctctagggagagcctcttatcaccccaatgatagagatgggatgacaaaggccccaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctctagggagagcctcttatcaccccaatgatagagatgggatgacaaaggccccaaat 320
Query: 121 cattgtggtcacatagcttctgtgtgcttagtgatgataattaccatgtcagccaggctc 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 cattgtggtcacatagcttctgtgtgcttagtgatgataataaccatgtcagccaggctc 380
Query: 181 caagtctaggctcagaagcattgtgcagctttatctcctgtgggttccttttcttgctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagtctaggctcagaagcattgtgcagctttatctcctgtgggttccttttcttgctct 440
Query: 241 tgttttttctgtgtgtgtatgacagggtcccccatgtagcccaagctggcatggaactgg 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttctttctgtgtgtgtatgacagggtcccccatgtagcccaagctggcatggaactgg 500
Query: 301 taactggtggttctcccacctcagctgcctaagagctgggcttatagatctaaaccctgc 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taactggtcgttctcccacctcagctgcctaagagctgggcttatagatctaaaccctgc 560
Query: 361 tcaaccccatcatttcctacattgtctcctttgcaaccttctctgtaagaaccatgcact 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 tcaaccccatcatttcctacattgtctcctttgcaaccttctctgtaagaatcatgcact 620
Query: 421 tcttcccatgctatgaggacctgaggtgtgtgttggcccctctagtccaagattatttgt 480
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttcccatgctatgaggacctaaggtgtgtgttggcccctctagtccaagattatttgc 680
Query: 481 tccagggtgttccaagaactgctctgtgagaaaccagggcaatgatatttaaccccc-gt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 tccagggtgttccaagaactgctctgtgagaaaccagggcaatgatatttaaccccccgt 740
Query: 540 aggtgacctcaagttgaacaaggccctctcgtttctcagtgcgcctcagccctgcactgc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aggtgacctcaagttgaacaaggccctctcgtttctcagtgcgcctcagccctgcactgc 800
Query: 600 tgcatagcgctgtgcagccggagttttgcatc 631
||||||||||||||||||| ||||||||||||
Sbjct: 801 tgcatagcgctgtgcagccagagttttgcatc 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_o08.g1 MSMg01no505_o08.g1 CHROMAT_FILE:
MSMg01no505_o08.g1 PHD_FILE: MSMg01no505_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:55 2005
(319 letters)
>mm_chr7_56337630_56338348
Length = 719
Score = 617 bits (319), Expect = 0.0
Identities = 319/319 (100%)
Strand = Plus / Minus
Query: 1 gacaacagctggccctgccaatctccatggcaacactccagtaactacagactccagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gacaacagctggccctgccaatctccatggcaacactccagtaactacagactccagtca 460
Query: 61 acaggaaacatttatatatacacacaagctcaataggtacacttaactgcatattataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 acaggaaacatttatatatacacacaagctcaataggtacacttaactgcatattataca 400
Query: 121 tccatagaattcttgttgatgagtttctggggttcaaaaaaatttctgttcctcattgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tccatagaattcttgttgatgagtttctggggttcaaaaaaatttctgttcctcattgga 340
Query: 181 tgtgtcaaaacttcagtaaaaagctgccaagaaggaagagtgcatcctagagagaatatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tgtgtcaaaacttcagtaaaaagctgccaagaaggaagagtgcatcctagagagaatatc 280
Query: 241 ccacactggcccagtgaggagccaggccagcttgcacacacgtgatctatgccagtaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ccacactggcccagtgaggagccaggccagcttgcacacacgtgatctatgccagtaatc 220
Query: 301 acctgggctttgtgctagg 319
|||||||||||||||||||
Sbjct: 219 acctgggctttgtgctagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
