Query= MSMg01no506_h10.b1 MSMg01no506_h10.b1 CHROMAT_FILE:
MSMg01no506_h10.b1 PHD_FILE: MSMg01no506_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:40 2005
(627 letters)
>mm_chr7_104613387_104614413
Length = 1027
Score = 1125 bits (582), Expect = 0.0
Identities = 614/626 (98%), Gaps = 5/626 (0%)
Strand = Plus / Plus
Query: 4 ggaattcattaattctc--ggtggcttcaaattcatggtaatcttcctgccttcaagtgc 61
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattaa--cccagggtggcttcaaattcatggtaatcttcctgccttcaagtgc 261
Query: 62 tggaattacagatctgaaccaccatgtctagctttacaattgtactctttaaaagaaaaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tggaattacagatctgaaccaccatgtctagctttacaattgtactctttaaaagaaaaa 321
Query: 122 aaaatgactgtggttatgcaatctgcaatctctgccatatttactcaaaagttctaagca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaaatgactgtggttatgcaatctgcaatctctgccatatttactcaaaagttctaagca 381
Query: 182 gctgtttttactaatttcacatttgcatgttatagtgtatgtgtgaaggtcagaggacaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gctgtttttactaatttcacatttgcatgttatagtgtatgtgtgaaggtcagaggacaa 441
Query: 242 cttgcaggactctggtctctcctcttaccatgtgtgtcccaggaatcgaactcaggtcat 301
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 442 cttgcaggactctggtctttcctcttaccatgtgggtcccaggaatcgaactcaggtcat 501
Query: 302 gaggcatgactggaaacccgttttctagctgagcaatctctttaggtttcaaccagctgt 361
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gaggcatggctggaaacccgttttctagctgagcaatctctttaggtttcaaccagctgt 561
Query: 362 cttagtaccttatctttaagaacgtggtggcacacgcctttaatcccagcactcgggagg 421
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 562 cttagtaccttatctttaagaacatggtggcacacgcctttaatcccagcactcgggagg 621
Query: 422 cagaggcaggcagatttctgagttcgaggccagcctggtctacaaagtgagttccaggac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cagaggcaggcagatttctgagttcgaggccagcctggtctacaaagtgagttccaggac 681
Query: 482 agccaggactatacagagaaaccctgtcttgaaaaaacaaacaaacaaacaaaaaacaaa 541
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 682 agccagggctatacagagaaaccctgtctcgaaaaaacaaacaaacaaacaaaaaacaaa 741
Query: 542 acaaacaaaaaaaaacccctaaaatactcttattttcaggcatacatcatatgcctgtta 601
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 acaaacaaaaaaaa-cccctaaaatactcttattttcaggcatacatcatatgcctgtta 800
Query: 602 ttccagcattgaagaagcatccaggc 627
||||||||||||||||||||||||||
Sbjct: 801 ttccagcattgaagaagcatccaggc 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no506_h10.g1 MSMg01no506_h10.g1 CHROMAT_FILE:
MSMg01no506_h10.g1 PHD_FILE: MSMg01no506_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:41 2005
(620 letters)
>mm_chr7_104775045_104776064
Length = 1020
Score = 704 bits (364), Expect = 0.0
Identities = 378/388 (97%), Gaps = 10/388 (2%)
Strand = Plus / Minus
Query: 1 ataattgatggcagcttccagtgaatacacaagccagggctacaagtgtaactcagtggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ataattgatggcagcttccagtgaatacacaagccagggctacaagtgtaactcagtggt 319
Query: 61 tgtgcacctgagtagtggacaaaccttgctggtccccagcacgggagaccggtagggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgtgcacctgagtagtggacaaaccttgctggtccccagcacgggagaccggtagggtgg 259
Query: 121 gagcagtaagtgtcggggaaggaggaaggtaatggagcaatggcacgttctgaaattatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gagcagtaagtgtcggggaaggaggaaggtaatggagcaatggcacgttctgaaatta-- 201
Query: 181 ttgatcgtgtgctaccaaatttatttactttcaaaggatttctctgagtaccaaaaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 200 ------gtgtgctaccaaatttatttactttcaaaggatttctctgagtaccaaaaa--t 149
Query: 241 tgccttttgtctttcctttctctttttgttgttgttgttgttttttgagacaaagtctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tgccttttgtctttcctttctctttttgttgttgttgttgttttttgagacaaagtctca 89
Query: 301 ttaaatagcccaggctggcctagaactcataatcctcctgcctcagcatccccactgcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 ttaaatagcccaggctggcctagaactcataatcctcctgcctcagcatccccactgcta 29
Query: 361 ggaatataaccacacaccatgatttgta 388
||||||||||||||||||||||||||||
Sbjct: 28 ggaatataaccacacaccatgatttgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
