Query= MSMg01no507_k05.b1 MSMg01no507_k05.b1 CHROMAT_FILE:
MSMg01no507_k05.b1 PHD_FILE: MSMg01no507_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:15 2005
(263 letters)
>mm_chr7_30153168_30153830
Length = 663
Score = 480 bits (248), Expect = e-140
Identities = 259/263 (98%)
Strand = Plus / Minus
Query: 1 aagcttagntgctgtcattctcagtcaatctccccacaagcgacacagctctggactggg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aagcttagttgctgtcattctcagtcaatctccccacaagcgacacagctctggactggg 288
Query: 61 tctccccagcatagcaacgcctgcaacaatagatctttatactcccctgttgtaaaatat 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 287 tctccccagcatagcaacgcctgcaaaaatagatctttatactcccctgttgtaaaatat 228
Query: 121 aaatgcggtgacaacagtgtaccgtgtaagggggtgcctggggagcccatgccaaggtgt 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 227 aaatgcggtgacaacagtgtaccgtgtaagggggtgcctggggggcccatgccaaggtgt 168
Query: 181 tcccctgagaaaccaagccttgcgacagacctggtataaaggaggtttatttggggggaa 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 tcccctgagaaatcaagccttgcgacagacctggtataaaggaggtttatttggggggaa 108
Query: 241 ggggaggagaggggagcctaaag 263
|||||||||||||||||||||||
Sbjct: 107 ggggaggagaggggagcctaaag 85
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no507_k05.g1 MSMg01no507_k05.g1 CHROMAT_FILE:
MSMg01no507_k05.g1 PHD_FILE: MSMg01no507_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:15 2005
(625 letters)
>mm_chr7_30499391_30500415
Length = 1025
Score = 1025 bits (530), Expect = 0.0
Identities = 602/626 (96%), Gaps = 2/626 (0%)
Strand = Plus / Plus
Query: 1 tagaccaggatggccccaaatccctacatgctgtgcacatatgtgtgggttagaggggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaccaggatggccccaaatccctacatgctgtgcacatatgtgtgggttagaggggca 260
Query: 61 ccctgtgggatttggctcttttctttcttcatgtgggtcccagggactgaattcaagtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctgtgggatttggctcttttctttcttcatgtgggtcccagggactgaattcaagtcc 320
Query: 121 tcaggcttagcagcaagcatacccatttccatacatacagaacaactttgagcctgccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaggcttagcagcaagcatacccatttccatacatacagaacaactttgagcctgccac 380
Query: 181 ctctcctgaggacacatggcaaggaataggagccctaggtgagaatgtagaaaattcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctcctgaggacacatggcaaggaataggagccctaggtgagaatgtagaaaattcttt 440
Query: 241 cctgtgttttcagaagacatggcttttacctgtgatggtcccgatgtgaatataaccctc 300
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctgagtattcagaagacatggcttttacctgtgatggtcccgatgtgaatataaccctc 500
Query: 301 attcttgccagtggtgagggctaggacgtactcagaaccaccgccactgaaatacaccgg 360
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 501 attcttgccagtggtgagggctaggacgtactcagaaccattgccactggcatacaccgg 560
Query: 361 gcacagtctcttgatgcactcgctaggcaggacacgaacccatctgcctggggggacaag 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 gcacagtctcttaatgcactcgctaggcaggacacgaacccatctgcctgggggg-caaa 619
Query: 421 catggg-actcaaaaccaggttggtcaaaatggggcctgaatcccaaccctttccttgtg 479
|||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||
Sbjct: 620 catggggactcaaaaccaggttggtcaaaatggggcctgaaccccaaacctttccttctg 679
Query: 480 ggtcttacagagcctgctacctgtcctcttagcctggagcaacatgtctttgtggagctg 539
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 680 ggtcttacagaccctgctacctgtcctcttagcctggagcaacatgtctttgtagagctg 739
Query: 540 gggagacttgagaacaacacctgtcacttttgtaacaacaccccatccccattctatcct 599
|||||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 740 gggagactccagagcaacacctgtcacttttgtaacaacaccccacccccattccatcct 799
Query: 600 ctacccctgaattctagcatgctatg 625
|||| | ||||||||| | |||||||
Sbjct: 800 ctactcttgaattctaacgtgctatg 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
