Query= MSMg01no507_n13.b1 MSMg01no507_n13.b1 CHROMAT_FILE:
MSMg01no507_n13.b1 PHD_FILE: MSMg01no507_n13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:31 2005
(337 letters)
>mm_chr7_148615361_148616098
Length = 738
Score = 611 bits (316), Expect = e-179
Identities = 333/339 (98%), Gaps = 3/339 (0%)
Strand = Plus / Plus
Query: 1 gtgctggtctgcacagaaagcctggctactgtcgcaggctgttctctccccaccgtccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgctggtctgcacagaaagcctggctactgtcgcaggctgttctctccccaccgtccca 260
Query: 61 tccaagcacagactcttaaagcaagcatctatttagaatatttatttattttttacatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaagcacagactcttaaagcaagcatctatttagaatatttatttattttttacatga 320
Query: 121 caagacacaaaaagttacaacttcttaaaactcttcaaaagaaaaaa-tataattctgta 179
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 caagacacaaaaagttacaacttcttaaaactcttcaaaagaaaaaaatataattctgta 380
Query: 180 agcagcagcagcagctttcaaggtacagacgtaagaggaggggtggctcccaggagcaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcagcagcagcagctttcaaggtacagacgtaagaggaggggtggctcccaggagcaac 440
Query: 240 ggtgatcnatgggcagcccagactggagccccaggtagtgtcactgggaaggggcctcca 299
||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgaactaggggcagcccagactggagccccaggtagtgtcactgggaaggggcctcca 500
Query: 300 tggagggggttggtg-ttgagggacacagcaccagcact 337
||||||||||||| | |||||||||||||||||||||||
Sbjct: 501 tggagggggttgg-gcttgagggacacagcaccagcact 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_n13.g1 MSMg01no507_n13.g1 CHROMAT_FILE:
MSMg01no507_n13.g1 PHD_FILE: MSMg01no507_n13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:31 2005
(512 letters)
>mm_chr7_148767733_148768644
Length = 912
Score = 706 bits (365), Expect = 0.0
Identities = 374/377 (99%)
Strand = Plus / Minus
Query: 7 aattcccaccagatgaaataaatgatacacaggtttaaagtgcaggtgacactcggagac 66
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 377 aattcccaccagatgaaataaatgatacacaggtttaaagtgcaggtgacacttggagac 318
Query: 67 aggtggcatctgcatcatctagtacaaatgtgccactgagcagtagtacccggcccatgt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aggtggcatctgcatcatctagtacaaatgtgccactgagcagtagtacccggcccatgt 258
Query: 127 tccctactaatgtcacacttctaactcacaggcaaagggcctcatcttgctaaaacagat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tccctactaatgtcacacttctaactcacaggcaaagggcctcatcttgctaaaacagat 198
Query: 187 ctagaaaaaaacaaaaaatcaaaacaaaacaaaaccaacaacaagaagataatgtgacaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ctagaaaaaaacaaaaaatcaaaacaaaacaaaaccaacaacaagaagataatgtgacaa 138
Query: 247 tggttttgcttgggaccatatgtagtggcacatgcctttaattccagtactcaggaggca 306
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 137 tggttttgcttgggaccagatgtagtggcacatgcctttaattccagcactcaggaggca 78
Query: 307 gagacaggcagaactctgagtctgaggtcactgaggtcagcctgacctacatagagagct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 gagacaggcagaactctgagtctgaggtcactgaggtcagcctgacctacatagagagct 18
Query: 367 ccaggccagtcagggtt 383
|||||||||||||||||
Sbjct: 17 ccaggccagtcagggtt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
