NNNNAACTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTGTTTTTCTCTGAGCCCCACTTTTTAATGGGGTTAT
TTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATT
AGTCCTCTATCTGATCTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGG
TGGTCTTTTTGTCTTATTGATGGTGTCTTTTGCCTTATAGAAGCTTTGCA
GTTTCATGAGGTCCCATTTGTCAATCCTCAATCTTACAGTACAAGCCATT
GTTGTTCTATTCAGGAATTTTTCCCCTGTCTAATTCTTAACATAGTGAGA
AATCATCAATACTTTCAAACATAGCAATAGTATTAACCAGACTCAATCAT
TTCATACTAGGAATTATCACAGTTTTTTTTAAATAAATATGATGTTTCTT
AGTGTTCTATTAATGGGAAGAGACCAAGGCAACTCTCATAAAAGAAAGCA
TCTAACGGCGGGATTGCTTACAGGTTTAGAGGGTTACTCTGTGATCATCA
TGGTGGATATCTGGCAGAAATGTCACTGGATCAGTAGCTGACAGCTCTAC
ATCCTTATCTAGAGACACACAGAGAGAGAGAGACAGACAGACAGACAGAC
AGACAGACAGACAGACAGACACTGGGCCCAGCATGGGCTTCTGGATCTCT
AAAGTCTGCTGCCAGAAACACACCTCCCTCAAAAGGCCACACTTCTTCAT
TCTTCCC

NCCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGAGTGTCTGTATGCCTGAAATG
TTTTTATTTTTTAACATTTTGTCTTCCTTTTTATATCTAATATTAAAATA
TAATTGATAAGCTATAAAATTCATTGAATTGAAGTTTATAGTCCAATGCT
CTTATTATATTTATAAGGTTATGTAGCCATTATTTAAGGTTAGAAAATTT
TCATCACCTCCAAGAGAAGAAAGTTCTACCTTTGATCAAACCCATTGTCC
TTTCTCTCCTAGAATCTGAAGTACTCAAAAGAGTTTAATTTATTTTTTTT
AGAGTGCTATTATAGACATTTTATGTGATAGAATTAGGATGCATGGGTTT
TTGTGACTGAGTGATTGCCTCTTAGTATTTCCAAGTTTCATCTTGTCCTT
GTGAATGTTTCATCATCTCAACAAAGCTAAGAATTATCCAGAAAGAGGGA
CCGAATTGAGAAAATGTCCCCATAAGATTGGAGATAGGCAACTCTGCAGG
GGAATTTGTTGATTGATGATTGATGTGGGGGAACCCAGCCCACTGTGGGC
GGTCTACACTGGGCAGGCCATCCTGAATTGGAAAGCAAGTCTGTAAGCAG
CTGTCCTCCATGGCCCCTGCTTCAATTTCTGCCTCCATGTTCTTGTCTTT
AGTTCCTCTTGCTTTGGCTTCCTCAGATGATGACTTGCAATCTCAAAGCC
AAGTAAATAA

Query= MSMg01no508_c03.b1 MSMg01no508_c03.b1 CHROMAT_FILE:
MSMg01no508_c03.b1 PHD_FILE: MSMg01no508_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:56 2005
         (664 letters)



>mm_chr7_64520651_64521716
          Length = 1066

 Score = 1172 bits (606), Expect = 0.0
 Identities = 656/692 (94%), Gaps = 32/692 (4%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttgtttttctctgagccccactttttaatggggttatttgattttctggagtc 64
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgtttagctctgagccccactttttaatggggttatttgattttctggagtc 264

                                                                       
Query: 65  caccttcttgagttctttatatatattggatattagtcctctatctgatctaggataggt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caccttcttgagttctttatatatattggatattagtcctctatctgatctaggataggt 324

                                                                       
Query: 125 aaagatcctttcccaatctgttggtggtctttttgtcttattgatggtgtcttttgcctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagatcctttcccaatctgttggtggtctttttgtcttattgatggtgtcttttgcctt 384

                                                                       
Query: 185 atagaagctttgcagtttcatgaggtcccatttgtcaatcctcaatcttacagtacaagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atagaagctttgcagtttcatgaggtcccatttgtcaatcctcaatcttacagtacaagc 444

                                                                       
Query: 245 cattgttgttctattcaggaatttttcccctgtctaattcttaacatagtgagaaatcat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cattgttgttctattcaggaatttttcccctgtctaattcttaacatagtgagaaatcat 504

                                                                       
Query: 305 caatactttcaaacatagcaatagtattaaccagactcaatcatttcatactaggaatta 364
           ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 505 caatactttcaaacatagcaataatattaaccagactcaatcattacatactaggaatta 564

                                                                       
Query: 365 tcacagttttttttaaa--taaatatgatgtttcttagtgttctattaatgggaagagac 422
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcacagttttttttaaaaataaatatgatgtttcttagtgttctattaatgggaagagac 624

                                                                       
Query: 423 caaggcaactctcataaaagaaagcatctaacggcgggattgcttacaggtttagagggt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caaggcaactctcataaaagaaagcatctaacggcgggattgcttacaggtttagagggt 684

                                                                       
Query: 483 tactctgtgatcatcatggtggatatctggcagaaatgtcactggatcagtagctgacag 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tactctgtgatcatcatggtggatatctggcagaaatgtcactggatcagtagctgacag 744

                                                                       
Query: 543 ctctacatccttatctagagacacaca----------------------gagagagagag 580
           |||||||||||||||||||||||||||                      |||||||||||
Sbjct: 745 ctctacatccttatctagagacacacacacacacagagagagagagagagagagagagag 804

                                                                       
Query: 581 acaga--------cagacagacagacagacagacagacagacagacactgggcccagcat 632
           |||||        |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 acagagacagagacagacagacagacagacagacagacagacagacactgggcccagcat 864

                                           
Query: 633 gggcttctggatctctaaagtctgctgccaga 664
           ||||||||||||||||||||||||||||||||
Sbjct: 865 gggcttctggatctctaaagtctgctgccaga 896


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1066
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1056
Effective search space:   690624
Effective search space used:   690624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)