Query= MSMg01no509_b23.b1 MSMg01no509_b23.b1 CHROMAT_FILE:
MSMg01no509_b23.b1 PHD_FILE: MSMg01no509_b23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:16 2005
(645 letters)
>mm_chr7_3882213_3883257
Length = 1045
Score = 1216 bits (629), Expect = 0.0
Identities = 638/641 (99%)
Strand = Plus / Minus
Query: 5 gaattccatcaagtttcgaaaaggccttcgcacagttaacatagttgctactggggtatt 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gaattccatcaagtctagaaaaggccttcgcacagttaacatagttgctactggggtatt 651
Query: 65 ccagaaggtgatgaccatgctaaaggttggctggcattttataagagaagagtttaaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 ccagaaggtgatgaccatgctaaaggttggctggcattttataagagaagagtttaaaac 591
Query: 125 agcagactgatagtgatagaaagtaacagtaaccacagagactaaggtcctcagaaatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 agcagactgatagtgatagaaagtaacagtaaccacagagactaaggtcctcagaaatga 531
Query: 185 gcaataataagatttcacctgagaacatgttaagaagttcttaagttatccttctctctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gcaataataagatttcacctgagaacatgttaagaagttcttaagttatccttctctctc 471
Query: 245 atacaactttaaaaagccttctctgtcattacaaccaggaatactggtgtccttatgaaa 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 470 atacaactttaaaaagccttctctgtcattgcaaccaggaatactggtgtccttatgaaa 411
Query: 305 aaatatatatgatcttgcacagtaagtcacagatttggagggatactgtttccctgtcct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aaatatatatgatcttgcacagtaagtcacagatttggagggatactgtttccctgtcct 351
Query: 365 gtggtagacacaaaatccttaactaaataagtgcaagtaatacatcctggcatatgagat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gtggtagacacaaaatccttaactaaataagtgcaagtaatacatcctggcatatgagat 291
Query: 425 gaatggaaaaaaaaaagatcaacaggtgtattctccatattctccagaagtcaaggttgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gaatggaaaaaaaaaagatcaacaggtgtattctccatattctccagaagtcaaggttgg 231
Query: 485 tttaaaagtataaaacataaactcacctctctctttctctctctccctccctctttttct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tttaaaagtataaaacataaactcacctctctctttctctctctccctccctctttttct 171
Query: 545 ctccctctctctcccttcctttctctctctccattcctctttccctcctccctctgtgta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ctccctctctctcccttcctttctctctctccattcctctttccctcctccctctgtgta 111
Query: 605 tgtgcttgtgtttcatccacagaaataaagagaaaaatgtt 645
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 tgtgcttgtgtttcatccacagaaataaagagaaaaatgtt 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_b23.g1 MSMg01no509_b23.g1 CHROMAT_FILE:
MSMg01no509_b23.g1 PHD_FILE: MSMg01no509_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:16 2005
(603 letters)
>mm_chr7_3659142_3660144
Length = 1003
Score = 1135 bits (587), Expect = 0.0
Identities = 599/603 (99%)
Strand = Plus / Plus
Query: 1 tttgtgatgttaggggagaagtcagggctagaaagtgatagctttgctaccttgaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtgatgttaggggagaagtcagggctagaaagtgatagctttgctaccttgaaaaaa 260
Query: 61 acttcagttagattcagttaccatggtgctctcacaaactgagggagaataaaagatcct 120
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 261 acttcagttagattcagttaccgtggtgctcttacaaactgagggagaataaaagatcct 320
Query: 121 gcttctggaaagtaaataccaagctagcatcattagtcttcaggaattcctggaactagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttctggaaagtaaataccaagctagcatcattagtcttcaggaattcctggaactagt 380
Query: 181 gagttaaaccttatgaaacttatggcgtccttttaaagttttcacatgaattttcttgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagttaaaccttatgaaacttatggcgtccttttaaagttttcacatgaattttcttgag 440
Query: 241 acacttaagaatatgtcattaaacatgtctaggaaaagttaaaaaacacgttaaacaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacttaagaatatgtcattaaacatgtctaggaaaagttaaaaaacacgttaaacaagg 500
Query: 301 tttggtttagacttgaggcctatcttgagtttctgggcccttcagaagtaagctggctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttggtttagacttgaggcctatcttgagtttctgggcccttcagaagtaagctggctgg 560
Query: 361 ctcaactaggcaccaccaggagtgaatagtcaggacctatttggcaccaagttttcccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcaactaggcaccaccaggagtgaatagtcaggacctatttggcaccaagttttcccaa 620
Query: 421 aatccttcggattagagtaatccagacattcacaatgagattaatctcatccttttatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatccttcggattagagtaatccagacattcacaatgagattaatctcatccttttatca 680
Query: 481 gaaactaagcaatcctcacctgcccatatcgcctgtcctgtcctcgttctccactcagca 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 gaaactaagcaatcctcacctgcccatatcgcctgtcctgtcctcgtcctccactcagca 740
Query: 541 tggttcttttaccctgcacagcttctagaatgtgagttgcagctacctgtgggtagttct 600
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tggttcttttacccggcacagcttctagaatgtgagttgcagctacctgtgggtagttct 800
Query: 601 caa 603
|||
Sbjct: 801 caa 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
