Query= MSMg01no510_m20.b1 MSMg01no510_m20.b1 CHROMAT_FILE:
MSMg01no510_m20.b1 PHD_FILE: MSMg01no510_m20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:28 2005
(657 letters)
>mm_chr7_66009870_66010926
Length = 1057
Score = 1180 bits (610), Expect = 0.0
Identities = 646/662 (97%), Gaps = 10/662 (1%)
Strand = Plus / Plus
Query: 1 gacagacacacatagcaactgtgtttaacttggccactcactcttacttactcatgcagt 60
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 gacagacacacatagcaactgtgtttaacttggccactcactcaaacttactcatgcagt 260
Query: 61 caaccctcacatgcgtgccattggtgtccagtggtgtttttcttggctacagtatgagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaccctcacatgcgtgccattggtgtccagtggtgtttttcttggctacagtatgagaa 320
Query: 121 gttaaaggggaaaaggtgttttgaaactccagttgagggctctggtgggaggaccattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaaaggggaaaaggtgttttgaaactccagttgagggctctggtgggaggaccattct 380
Query: 181 gccagagatgcctttagaggcccactatcatcttggtagacctcccaccctaaccctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccagagatgcctttagaggcccactatcatcttggtagacctcccaccctaaccctaaa 440
Query: 241 tgtagtg----tttttggaaaagggtagaatgatacactgcttaggggcaatggagctgg 296
||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtagtgggagt----ggaaaagggtagaatgatacactgcttaggggcaatggagctgg 496
Query: 297 gcagtaggtggggctgagtgaagcctggctataacatggctataacatacctttgaggtt 356
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 497 gcagtaggtggggctgagtgaagcctggctataacatggttataacatagctttgaggtt 556
Query: 357 ttggtcaaatcagttctcacccagatccatggacatggtaggaccacaagatctcttgag 416
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 557 ttggtcaaatcagttctcacccagattcatggacatggtaggaccacaagatctcttgag 616
Query: 417 tccccctctgccctcttccactatgtagtacatttttttttgaaaaaattgcaaagacct 476
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 617 tccccctctgccctcttccactatgtagtacatttttttt-gaaaaaattgcaaagacct 675
Query: 477 tgcaatggatgctatcaattaggaacaaagagaatgagtgtgcacctgtgccccagttat 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgcaatggatgctatcaattaggaacaaagagaatgagtgtgcacctgtgccccagttat 735
Query: 537 cacagccttccaacctctgtgatcactgtgtgcttaccatctgactctaaatttgccctt 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cacagccttccaacctctgtgatcactgtgtgcttaccatctgactctaaatttgccctt 795
Query: 597 agcagctggcaggtgtgaggttgtgactggctctgtttta-aaaggcaatcaacacacaa 655
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 796 agcagctggcaggtgtgaggttgtgagtggctctgttttacaaaggcaatcaacacacaa 855
Query: 656 ga 657
||
Sbjct: 856 ga 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_m20.g1 MSMg01no510_m20.g1 CHROMAT_FILE:
MSMg01no510_m20.g1 PHD_FILE: MSMg01no510_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:28 2005
(431 letters)
>mm_chr7_66055743_66056573
Length = 831
Score = 793 bits (410), Expect = 0.0
Identities = 425/430 (98%)
Strand = Plus / Minus
Query: 1 cccacttgttgtcacttcccaccgtggccagcaagacgaaaggatttggctatgtgctga 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 630 cccacttgttgtcacttcccaccgtggccagcaagacgaaaggacttggctatgtgctga 571
Query: 61 tataatagcctctcttgccctgtcacattcacttctggtaaagtgccgtgagctctttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tataatagcctctcttgccctgtcacattcacttctggtaaagtgccgtgagctctttga 511
Query: 121 agaaagcgtgtgtctttcatccagcaaagagacctgggtaccctcctactgtcctcatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agaaagcgtgtgtctttcatccagcaaagagacctgggtaccctcctactgtcctcatgt 451
Query: 181 gtacacaggtcaggtggcctgttgcttcttggttactcctagccatctgtaacaagtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtacacaggtcaggtggcctgttgcttcttggttactcctagccatctgtaacaagtctg 391
Query: 241 ttcttctccacacctatcttatcttctcaaactaaaagctagacaattatgtagatggtc 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 390 ttcttctccacacctatcttatcttctcaaactaaaagctaaacaattatgtagatggtc 331
Query: 301 atgtgtccaggtgggtgagttcactggaattccagtgctttgctacagctgctcctcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atgtgtccaggtgggtgagttcactggaattccagtgctttgctacagctgctcctcctg 271
Query: 361 ctagctacagtctcagtcttgacatgtgcagtatacttatacatccttcctatccaaaac 420
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttagctacagtctcaatcttgacatgtgcagtatacttatacatccttcctatccaaaac 211
Query: 421 gactgcaata 430
|||||||||
Sbjct: 210 aactgcaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
