Query= MSMg01no511_g15.b1 MSMg01no511_g15.b1 CHROMAT_FILE:
MSMg01no511_g15.b1 PHD_FILE: MSMg01no511_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:17 2005
(611 letters)
>mm_chr7_79046655_79047668
Length = 1014
Score = 1094 bits (566), Expect = 0.0
Identities = 601/614 (97%), Gaps = 3/614 (0%)
Strand = Plus / Plus
Query: 1 tagattttggccttctcagaaacaaggtgagcatctggtcccaccgaggaggatggaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagattttggccttctcagaaacaaggtgagcatctggtcccaccgaggaggatggaaca 260
Query: 61 ggaccacatctcagttctcaacgttctgcctgtgtgttccatgttgtctacactttcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaccacatctcagttctcaacgttctgcctgtgtgttccatgttgtctacactttcatc 320
Query: 121 ccaggaactgccctcgttttcacaatgtgtctactggggactggatgtgactactccttc 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaggaactgcccttgttttcacaatgtgtctactggggactggatgtgactactccttc 380
Query: 181 ctcccaatggcgttacgtatcagtacatgttgcaccaagacttgtggtgaggcagcagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcccaatggcgttacgtatcagtacatgttgcaccaagacttgtggtgaggcagcagat 440
Query: 241 actgggaaaaagggtgtgaagcagagctgctcacatcctggagaccagaagcaaaaggca 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgggagaaagggtgtgaagcagagctgctcacatcctggagaccagaagcaaaaggca 500
Query: 301 acaaggaggagcccaaccagtatccttttcaagagcatgtccacaatgacctaacttcat 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 acaaggaggagcccaaccagtatccttttcaagagcatgcccacaatgacctaacttcat 560
Query: 361 gtcaccagcccatcacctcccagtagtaccacagccagtgacctttccccaagcaggaac 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 gtcaccagcccatcacctcccagtagtaccacagccaatgacctttccccaagcaggaac 620
Query: 421 agtgagtgtttgagagcaagagcaactttacagtgaatctt---tgtctctccatttttg 477
|||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 621 agtgggtgtttgagagcaagagcaaatttacagtgaatcttctttgtctctccatttttg 680
Query: 478 ttctataaattcccagcagtcaggggtatggatgatgcattacttacagaaacaggaata 537
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctataaattcccaacagtcaggagtatggatgatgcattacttacagaaacaggaata 740
Query: 538 actcaaaagcagttgcgttaccacaaagtccattccaacatgggcgttgactcatgagag 597
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 741 actcaaaagcagttgcattaccacaaagtccattccaacatgggtgttgactcatgagag 800
Query: 598 gtacaaacatggac 611
||||||||||||||
Sbjct: 801 gtacaaacatggac 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1014
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1004
Effective search space: 603404
Effective search space used: 603404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_g15.g1 MSMg01no511_g15.g1 CHROMAT_FILE:
MSMg01no511_g15.g1 PHD_FILE: MSMg01no511_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:17 2005
(549 letters)
>mm_chr7_79203488_79204436
Length = 949
Score = 567 bits (293), Expect = e-166
Identities = 309/315 (98%), Gaps = 2/315 (0%)
Strand = Plus / Minus
Query: 1 ttacatacaaaagagcctaacaagggattccttgcccttgataaaattgtaaagcaggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 313 ttacatacaaaagagcctaacaagggattccttgcccttgataaaattgtaaagcaggtg 254
Query: 61 agccaataaaactcttctgctcagcttcattgctaaaggtgcttggaaaaaaaaatgggc 120
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 253 agccaataaaactcttctgctcagcttcattgctaaaggtgcttgg--aaaaaaatgggc 196
Query: 121 attgtcttagttagggttttacagctgtaaacagataccatgaccaaggcaactcttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 attgtcttagttagggttttacagctgtaaacagataccatgaccaaggcaactcttata 136
Query: 181 aggacaacatttaattggggctcccttacaagttcaacggttcactccattattatcaag 240
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 135 aggacaacatttaattggggcttccttaaaagttcaacggttcactccattattatcaag 76
Query: 241 gcaggagcatggcagcatccaggcaggcatagtgcaggaggagcttggaatagaacctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 gcaggagcatggcagcatccaggcaggcatagtgcaggaggagcttggaatagaacctaa 16
Query: 301 ggcttccactctact 315
|| ||||||||||||
Sbjct: 15 ggtttccactctact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
