Query= MSMg01no513_d22.b1 MSMg01no513_d22.b1 CHROMAT_FILE:
MSMg01no513_d22.b1 PHD_FILE: MSMg01no513_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:40 2005
(675 letters)
>mm_chr7_138410129_138411204
Length = 1076
Score = 1253 bits (648), Expect = 0.0
Identities = 666/672 (99%), Gaps = 1/672 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtatttcctgctaggcaactagagtctactgaaagggttcccacactgggtct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 205 gaattctgtatttcctgctaggcaactagagtctactgaaagggttcccacactgggcct 264
Query: 65 ctcttctgagccttaaattattttttgccaattgcctactctctagactgttctagaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcttctgagccttaaattattttttgccaattgcctactctctagactgttctagaaga 324
Query: 125 ttaggacctcgggttttttcccagcccccgggtgcctgtcatgcacccagagggaaggtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaggacctcgggttttttcccagcccccgggtgcctgtcatgcacccagagggaaggtg 384
Query: 185 tcctgaaattaacatagtgatgtgtcatcccttttgcacgtgagcaccacatttcagcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcctgaaattaacatagtgatgtgtcatcccttttgcacgtgagcaccacatttcagcag 444
Query: 245 gaaagtatgatatcgcctttcgacccaagatgctcatgcagcagaggccttggcaggcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaaagtatgatatcgcctttcgacccaagatgctcatgcagcagaggccttggcaggcca 504
Query: 305 cagagtgcaggtggtcctagaggcggaagaacctggggttggggctccttctctatctgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cagagtgcaggtggtcctagaggcggaagaacctggggttggggctccttctctatctgc 564
Query: 365 agtgtggacttgggacctgg-atggagctaatctgacagtgaggcccctgctaggaggcc 423
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtgtggacttgggacctgggatggagctaatctgacagtgaggcccctgctaggaggcc 624
Query: 424 ggagctttgtgaccccagcatgaatttaacgtctcgttcttatttaggataatgagcgca 483
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 625 ggagctttgtgaccccagcatgaatttaacgtctcattcttatttaggataatgagcaca 684
Query: 484 tacatgcaatgagccgttatcacaatttaaatggaaactacttgattggctacttactgg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tacatgcaatgagccgttatcacaatttaaatggaaactacttgattggctacttactgg 744
Query: 544 ggttgtttaaaggcaaacgtgattatatgatttaggtgcctcttaagagtatgaggtgac 603
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 745 ggttgtttaaaggcaaacgtgattatatgatttaggtgccgcttaagagtatgaggttac 804
Query: 604 attttgtttgctgaggatgtctctgtggtgactttcccccattctcacctgtgcagctac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 attttgtttgctgaggatgtctctgtggtgactttcccccattctcacctgtgcagctac 864
Query: 664 ttcagctcctga 675
||||||||||||
Sbjct: 865 ttcagctcctga 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1076
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1066
Effective search space: 708890
Effective search space used: 708890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_d22.g1 MSMg01no513_d22.g1 CHROMAT_FILE:
MSMg01no513_d22.g1 PHD_FILE: MSMg01no513_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:40 2005
(600 letters)
>mm_chr7_138583392_138584395
Length = 1004
Score = 1002 bits (518), Expect = 0.0
Identities = 542/552 (98%), Gaps = 4/552 (0%)
Strand = Plus / Minus
Query: 1 cttgtcttcatgacctgagtctaacaagagcagtcaattaaattatttcagtaataggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cttgtcttcatgacctgagtctaacaagagcagtcaattaaattatttcagtaataggtg 493
Query: 61 atgaaaattaagacagtctcaattaaagcaattatttaataatcccattaatgaaaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 atgaaaattaagacagtctcaattaaagcaattatttaataatcccattaatgaaaagct 433
Query: 121 tttccaaaatgaaaggagtgaatacttgggc----ggggggggggctatttgtaaatatc 176
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 432 tttccaaaatgaaaggagtgaacacttgggcggggggggggggggctatttgtaaatatc 373
Query: 177 agacagatccttttcttcctgtgacatttagtatttacactactttgatgtgcatgaagg 236
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 372 agacagatccttttcttcctgtgacatttagtatttatactactttgatgtgcatgaagg 313
Query: 237 cttttggagatatgtaagttatggagcatcacactaatgggatagatacctgcaggccta 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cttttggagatatgtaagttatggagcatcacactaatgggatagatacctgcaggccta 253
Query: 297 tgcagagcgaatacctccctgctatgacgtgtcttttcacctatgctctctgtttgtgtt 356
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 252 tgcagaacgaatacctccctgctatgacatgtcttttcacctatgctctctgtttgtgtt 193
Query: 357 gtgggcactgacctcagggtcttatgctacattctaagtggtactctaccaccaacctac 416
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gtgggcactgaccacagggtcttatgctacattctaagtggtactctaccaccaacctac 133
Query: 417 ccctccagctctgcccacttaggacatctttcttgaggaaaataaactgggtagacaaat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ccctccagctctgcccacttaggacatctttcttgaggaaaataaactgggtagacaaat 73
Query: 477 tctctgcttatattttcttctttctttcttttttctctccttcctttctttgtatttatt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tctctgcttatattttcttctttctttcttttttctctccttcctttctttgtatttatt 13
Query: 537 gattgattgatt 548
|||||||||||
Sbjct: 12 tattgattgatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1004
Length adjustment: 10
Effective length of query: 590
Effective length of database: 994
Effective search space: 586460
Effective search space used: 586460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
