Query= MSMg01no513_e17.b1 MSMg01no513_e17.b1 CHROMAT_FILE:
MSMg01no513_e17.b1 PHD_FILE: MSMg01no513_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:44 2005
(614 letters)
>mm_chr7_99642384_99643394
Length = 1011
Score = 1110 bits (574), Expect = 0.0
Identities = 601/612 (98%), Gaps = 5/612 (0%)
Strand = Plus / Plus
Query: 5 gaattctttcattttctgaactgtccccatattcatcactaataacaccttattacagag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcattttctgaactgtccccatattcatcactaataacaccttattacagag 264
Query: 65 aaaacttgtatgaacattaggaattgcttctatagtctcattccattctattagcctata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaacttgtatgaacattaggaattgcttctatagtctcattccattctattagcctata 324
Query: 125 agaagtctcttcagtacctctctcagtgaccccgtgctgtttgtctcttcttcccccatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 325 agaagtctcttcagtacctctctcagtgaccccgtgctgtttgtctcttcttcgcccgtg 384
Query: 185 agttgaactaatttttgccacttctccttcatcccaatttatctgtcttctcatcttgtc 244
|| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 ag---aactaatttttgccacttctccttcatctgaatttatctgtcttctcatcttgtc 441
Query: 245 cctgattcaacttgactataaagctcaacttcaactcgtctcttagctgaagtgtttatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cctgattcaacttgactataaagctcaacttcaactcgtctcttagctgaagtgtttatc 501
Query: 305 attcaaagcatttccataactttctcttctgatgtttgagagaggaagatcttaaatgat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 attcaaagcatttccataactttctcttctgatgtttgagagaggaagatcttaaatgat 561
Query: 365 tcaaaccatcactctttggatttgttcacttttagattgttactatagattttagctaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tcaaaccatcactctttggatttgttcacttttagattgttactatagattttagctaat 621
Query: 425 ggttacacttattgtttgtgtgatttgcagtgtctttaaaaaaaaaaaa--gcatctctt 482
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 622 ggttacacttattgtttgtgtgatttgcagtgtctttaaaaaaaaaaaaaagcatctctt 681
Query: 483 ccaagggagggaagaaactaatacttctatcaggctgtgatgcctattaaccacaacaat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ccaagggagggaagaaactaatacttctatcaggctgtgatgcctattaaccacaacaat 741
Query: 543 gaccagcatgatacccgaaatggtacaataatgtgctcttatcttggtagaaaccaacag 602
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaccagcaagatacccgaaatggcacaataatgtgctcttatcttggtagaaaccaacag 801
Query: 603 cagcaacttact 614
||||||||||||
Sbjct: 802 cagcaacttact 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1011
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1001
Effective search space: 604604
Effective search space used: 604604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_e17.g1 MSMg01no513_e17.g1 CHROMAT_FILE:
MSMg01no513_e17.g1 PHD_FILE: MSMg01no513_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:44 2005
(605 letters)
>mm_chr7_99821769_99822773
Length = 1005
Score = 816 bits (422), Expect = 0.0
Identities = 425/426 (99%)
Strand = Plus / Minus
Query: 1 tccatgcatatccatgcatctgtttaattcacttacctaacaggctttattcttaccttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tccatgcatatccatgcatctgtttaattcacttacctaacaggctttattcttaccttg 367
Query: 61 gcctaggctatttcctcttgagaggctagtcctcgaagagggtgagtgaacccagcctct 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcctagactatttcctcttgagaggctagtcctcgaagagggtgagtgaacccagcctct 307
Query: 121 caacattccctactagaaaatacggtgacaactaagatgctttaccgtgactcataataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 caacattccctactagaaaatacggtgacaactaagatgctttaccgtgactcataataa 247
Query: 181 tttcaaccttcgaaacaaatgaaaggtcaaatctcacttttaaaaatatatgtatgggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttcaaccttcgaaacaaatgaaaggtcaaatctcacttttaaaaatatatgtatgggta 187
Query: 241 ttttttctgcatgtatttatgtacaccatggcaccttggtgccctcagaagccagagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ttttttctgcatgtatttatgtacaccatggcaccttggtgccctcagaagccagagaga 127
Query: 301 acatcagatcctccagagcttgtgtgctgccttgttggtgtatactgttttgtgggtgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 acatcagatcctccagagcttgtgtgctgccttgttggtgtatactgttttgtgggtgtt 67
Query: 361 ggaaattgcattctggctctttggaagggtagccagttcttttaaccactgagtcatctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ggaaattgcattctggctctttggaagggtagccagttcttttaaccactgagtcatctc 7
Query: 421 accagc 426
||||||
Sbjct: 6 accagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
