Query= MSMg01no513_e22.b1 MSMg01no513_e22.b1 CHROMAT_FILE:
MSMg01no513_e22.b1 PHD_FILE: MSMg01no513_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:45 2005
(628 letters)
>mm_chr7_135849927_135850954
Length = 1028
Score = 853 bits (441), Expect = 0.0
Identities = 444/445 (99%), Gaps = 1/445 (0%)
Strand = Plus / Minus
Query: 184 tgatagataaaaatgttcttttaaaaaaaagtttatttttagtttatatgtgtgactgtt 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1028 tgatagataaaaatgttc-tttaaaaaaaagtttatttttagtttatatgtgtgactgtt 970
Query: 244 ttgtctgcatatctgtgtgtgcagtgcctgtggaagccagaaaagagtatcttctcccta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 ttgtctgcatatctgtgtgtgcagtgcctgtggaagccagaaaagagtatcttctcccta 910
Query: 304 gaactgaagttacaggtggtagtgagctattctgtgggtctggaagagcagccaagtgct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 gaactgaagttacaggtggtagtgagctattctgtgggtctggaagagcagccaagtgct 850
Query: 364 ctaactgctgagccatctctctctgcttctgcaaactttgtagtgatggtgtctcagtgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 ctaactgctgagccatctctctctgcttctgcaaactttgtagtgatggtgtctcagtgt 790
Query: 424 cttacctttggttttgtgttctttcccttctcccaggtatacaagaagagatgtacttcc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cttacctttggttttgtgttctttcccttctcccaggtatacaagaagagatgtacttcc 730
Query: 484 tctaggaaaatttacagttaacctgagtggttgcccgcagaacagtaccttcacggaaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tctaggaaaatttacagttaacctgagtggttgcccgcagaacagtaccttcacggaaca 670
Query: 544 cctctaccggatcatccaacatcttgtcccagcagtaagatagcattgtgaaagcaatga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 cctctaccggatcatccaacatcttgtcccagcagtaagatagcattgtgaaagcaatga 610
Query: 604 gcatgacagacccagttattttcca 628
|||||||||||||||||||||||||
Sbjct: 609 gcatgacagacccagttattttcca 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no513_e22.g1 MSMg01no513_e22.g1 CHROMAT_FILE:
MSMg01no513_e22.g1 PHD_FILE: MSMg01no513_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:45 2005
(569 letters)
>mm_chr7_135719778_135720746
Length = 969
Score = 1085 bits (561), Expect = 0.0
Identities = 567/569 (99%)
Strand = Plus / Plus
Query: 1 cagagctttaggtttgatccccaacagagcaaacagtaagagcaaaaacaccaatcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagctttaggtttgatccccaacagagcaaacagtaagagcaaaaacaccaatcacaa 260
Query: 61 tacaaaattgaaagagggctgtggatctagtcctttgtagagcacttgcctggtaagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaaaattgaaagagggctgtggatctagtcctttgtagagcacttgcctggtaagcag 320
Query: 121 ggaggtcatggattcaaccctagtcctgcaaaaataagtaaatgtatgtatgcaacaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaggtcatggattcaaccctagtcctgcaaaaataagtaaatgtatgtatgcaacaata 380
Query: 181 gtatttctacatctacacctgatgaataccgggtgttcatgatcccactgtagtcccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatttctacatctacacctgatgaataccgggtgttcatgatcccactgtagtcccaag 440
Query: 241 cctttctcagggtgagctcttaggcacaaaaattatcttgtgggttgacatacttcagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctttctcagggtgagctcttaggcacaaaaattatcttgtgggttgacatacttcagtt 500
Query: 301 aacaagaacagttagccagaagcagaactatagaagcccaaaaagcaaggtcagtacatt 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 aacaagaacagttagccagaagcagaactatagaaacccaaaaagcaaggtcagtacatt 560
Query: 361 tagagacgtttccagaacaaccggtttgggtggattaggtctttgttttagttttgtccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagagacgtttccagaacaaccggtttgggtggattaggtctttgttttagttttgtccg 620
Query: 421 gtggggcagtctacatgtgaggtttaatggcctgaatggtacttccatcatagagtcagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtggggcagtctacatgtgaggtttaatggcctgaatggtacttccatcatagagtcagt 680
Query: 481 tgtggtaaggtctgggacctgttacagcccttgcttatagctcatggttagtcaggttgg 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtggtaaggtctgggacatgttacagcccttgcttatagctcatggttagtcaggttgg 740
Query: 541 tgagactgtatgggtgtagcttctgacat 569
|||||||||||||||||||||||||||||
Sbjct: 741 tgagactgtatgggtgtagcttctgacat 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
