Query= MSMg01no514_o23.b1 MSMg01no514_o23.b1 CHROMAT_FILE:
MSMg01no514_o23.b1 PHD_FILE: MSMg01no514_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:01 2005
(576 letters)
>mm_chr7_141996529_141997503
Length = 975
Score = 1025 bits (530), Expect = 0.0
Identities = 561/572 (98%), Gaps = 3/572 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttcttcttccttgtaaggcaagcactttagtggctgagccatctccccagcc 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagttcttcatgcttgtaaggcaagcactttagtggctgagccatctccccagcc 264
Query: 65 cgtcatttatgatcaccttgtcttgttttgctgtccttgggatgaaggctggggacttct 124
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 cgtcatttatgatcacctcgtcttgttttgctgtccttgggatgaaggctggggacctct 324
Query: 125 ctaggacttttactgctatggagttgtcccagagacagggtgtggagaggccctgaagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 ctaggacttttactgctatggagttgtcccagagacagggtgtggagaggccccgaagag 384
Query: 185 cagccaggctcctgcaccctagggcatctcggttatgtgggcttttatgggctgatttat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagccaggctcctgcaccctagggcatctcggttatgtgggcttttatgggctgatttat 444
Query: 245 gaccaagcaagctgtacagtttggagttcgctgcctgctaaaatccagctaggaacaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaccaagcaagctgtacagtttggagttcgctgcctgctaaaatccagctaggaacaaaa 504
Query: 305 agcaatcttctaagtgagcccttgtagcttcacactccacatggaagctgcagcttttct 364
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 505 agcaatcttctaagtgagcccttgtagcttcacactccacacggaagctgcagcttttct 564
Query: 365 tcttttctgtttcttttttttttaagtggataatttcaaatgagtttcttgttactattg 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcttttctgttt-ttttttttttaagtggataatttcaaatgagtttcttgttactattg 623
Query: 425 tgttacaaatgttttggacaggccatcttccagctgaaaagctttgctgtgctatctaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgttacaaatgttttggacaggccatcttccagctgaaaagctttgctgtgctatctaga 683
Query: 485 atgaggatgtgtgcgctcagaagtgattccttgtcccactgacaaaggtgactctcccag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atgaggatgtgtgcgctcagaagtgattccttgtcccactgacaaaggtgactctcccag 743
Query: 545 ctgaccactgtgtgacctcacacctctgcctc 576
|||||||| |||||||||||| |||| ||||
Sbjct: 744 ctgaccacggtgtgacctcac--ctcttcctc 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 975
Length adjustment: 10
Effective length of query: 566
Effective length of database: 965
Effective search space: 546190
Effective search space used: 546190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_o23.g1 MSMg01no514_o23.g1 CHROMAT_FILE:
MSMg01no514_o23.g1 PHD_FILE: MSMg01no514_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:01 2005
(506 letters)
>mm_chr7_142180774_142181679
Length = 906
Score = 928 bits (480), Expect = 0.0
Identities = 496/506 (98%), Gaps = 8/506 (1%)
Strand = Plus / Minus
Query: 1 tccataccatatggagcttgggagaaaggaagtggaggaagaaaacaaaccaaaaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 tccataccatatggagcttgggagaaaggaagtggaggaagaaaacaaaccaaaaaacaa 779
Query: 61 aacctgatgacggagagggtaaggaaacaaagcaactggacaaggagtctggacagtgtg 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aacctaatgacggagagggtaaggaaacaaagcaactggacaaggagtctggacagtgtg 719
Query: 121 cagggctgagcagtcttgttgctataaatacaatttcttactggcaggctggggagctaa 180
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 cagggctgagca--------gctataaatacaatttcttactggcaggctggggagctaa 667
Query: 181 catcacagagcctttcttgtttttaaatatgtacccgtaagttaaagacatctgaaagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 catcacagagcctttcttgtttttaaatatgtacccgtaagttaaagacatctgaaagcc 607
Query: 241 acataggacctatacgaacttccattacattgtatgagtctagtagagtaataagaggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 acataggacctatacgaacttccattacattgtatgagtctagtagagtaataagaggga 547
Query: 301 tatagtttgagacacatccctattttttctttagtaaatgagctcccaaattgctttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tatagtttgagacacatccctattttttctttagtaaatgagctcccaaattgctttctt 487
Query: 361 ttcagtaattccactttttccaacaatatatttgaatgcctaaatgtcttttatattaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttcagtaattccactttttccaacaatatatttgaatgcctaaatgtcttttatattaat 427
Query: 421 ttggaacatgcactcctcagtgaatgttagagtccaatacattttctatctgtagtatac 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttggaacatgcactcctccgtgaatgttagagtccaatacattttctatctgtagtatac 367
Query: 481 acacaggcttccaaatgagtcctcga 506
||||||||||||||||||||||||||
Sbjct: 366 acacaggcttccaaatgagtcctcga 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
