Query= MSMg01no514_p11.b1 MSMg01no514_p11.b1 CHROMAT_FILE:
MSMg01no514_p11.b1 PHD_FILE: MSMg01no514_p11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:04 2005
(698 letters)
>mm_chr7_128780832_128781929
Length = 1098
Score = 727 bits (376), Expect = 0.0
Identities = 413/442 (93%), Gaps = 27/442 (6%)
Strand = Plus / Minus
Query: 7 gaattctgttagcattctactttaagcctgtgttaatggtgcatttgctcagttcttatt 66
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaattctgttagcattttactttaagcctgtgttaatggtgcatttgctcagttcttatt 383
Query: 67 ggattagaaatgtctttatatttttaaagaggaaatcatgtgtgcttattgatccatgta 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ggattagaaatgtctttatatttttaaagaggaaatcatgtgtgcttattgatccatgta 323
Query: 127 tgttttgttattaaacgatagttaaccttttgactgaggggtatctgctttaggcatgac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgttttgttattaaacgatagttaaccttttgactgaggggtatctgctttaggcatgac 263
Query: 187 aaagaaccagcagcaaggatcttctattttctagctgaaaatgtttctttatagttaaaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aaagaaccagcagcaaggatcttctattttctagctgaaaatgtttctttatagttaaaa 203
Query: 247 gaaggaaggaagggagagagagagaaagaatgagagaaaggaagtgagaaagaaaaagga 306
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 202 gaaggaaggaagggagagagagagaaagaaggagagaaaggaagtgagaaagaaaaagga 143
Query: 307 aagaaagaaaga------------cagaaagagagaaaggaaagaaagagaaagga---- 350
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 142 aagaaagaaagaaagaaagacagacagaaagagagaaaggaaagaaagagaaaggaaaga 83
Query: 351 -----------gaaaaaggaaagaaaggaactagaacaaaaatttttcttctgcaaggaa 399
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 aagagaaaggagaaaaaggaaagaaaggaactagaacaaaaatttttcttctgcaaggaa 23
Query: 400 aatctttccatccagagattag 421
||||||||||||||||||||||
Sbjct: 22 aatctttccatccagagattag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space: 748544
Effective search space used: 748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_p11.g1 MSMg01no514_p11.g1 CHROMAT_FILE:
MSMg01no514_p11.g1 PHD_FILE: MSMg01no514_p11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:04 2005
(663 letters)
>mm_chr7_128610076_128611138
Length = 1063
Score = 973 bits (503), Expect = 0.0
Identities = 542/555 (97%)
Strand = Plus / Plus
Query: 1 tcccttcaagtccatctgtatctgaaatcttcctctgaattcctggagaggataaagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcccttcaagtccatctgtatctgaaatcttcctctgaattcctggagaggataaagcag 260
Query: 61 tccaccagcctcctctcttcaaagcataaatgggattattcagacaaggctcaggggcca 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccaccagcctccgctcttcaaagcataaatgggattattcagacaaggctcaggggcca 320
Query: 121 ttgggccatgaagagactcctaatagtcaaccagcgactgcctgaaccatgatgatgaag 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 ttgggccatgaagagactcctaatagtcaaccagggactgcctgaaccatgatgatgaag 380
Query: 181 actaggaagcctctagtggtccacaaagctctgtgaggaatggagtccagcctgtgagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actaggaagcctctagtggtccacaaagctctgtgaggaatggagtccagcctgtgagaa 440
Query: 241 ggttaaggactctcagctaaggtaggtattagaggacggtcaaatggcttgagaaatcac 300
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 441 ggttaaggactctcagctaaggtaggtattagagaacagtcaaatggcttgagaaatcac 500
Query: 301 tcacatttgctaagtgctctatctcagtttgtatgttcttcaccaccgctgtggaaaaat 360
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 501 tcacatttgctaagtgctctatctcagtttgtatgttcttcagtagtgctgtggaaaaat 560
Query: 361 aatttgcgtttgcaaagtacagatgatatctgttggttttgcctccccagcatctattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatttgcgtttgcaaagtacagatgatatctgttggttttgcctccccagcatctattct 620
Query: 421 gtctttagctggtatcacctctttttttttttccactgtggaacagcttctgtgctttgt 480
|||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 621 gtctttagctggcatcacctcttttttttttcccactgtggaacagcatctgtgctttgt 680
Query: 481 ggtcccagttgaggaatgtatccgattatgttacttccatgaaggtggacctgtagcctg 540
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggttccagttgaggaatgtatctgattatgttacttccatgaaggtggacctgtagcctg 740
Query: 541 gaaccttcttgtctg 555
|||||||||||||||
Sbjct: 741 gaaccttcttgtctg 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
